FC875709
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A2_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus GN=Atp2a2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.520e-26 Identity = 75/176 (42.61%), Postives = 97/176 (55.11%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNP------CDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG ATVG W+ + DG V++ QL+++ QC DNP C F MT++LSVLV IEM N+LN+LSE+ SLL MPPW N WL+ ++ +S LHFLILYV L IF I PL+ +WL+VL I+ PV+L+DE LKFV R Sbjct: 843 VGAATVGAAAWWF---------IAADGGPRVSFYQLSHFLQCKE-------------------DNPDFEGVDCAIFESPY--PMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVAR 988
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A2_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus GN=Atp2a2 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.520e-26 Identity = 75/176 (42.61%), Postives = 97/176 (55.11%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNP------CDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG ATVG W+ + DG V++ QL+++ QC DNP C F MT++LSVLV IEM N+LN+LSE+ SLL MPPW N WL+ ++ +S LHFLILYV L IF I PL+ +WL+VL I+ PV+L+DE LKFV R Sbjct: 843 VGAATVGAAAWWF---------IAADGGPRVSFYQLSHFLQCKE-------------------DNPDFDGVDCAIFESPY--PMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVAR 988
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A1_BOVIN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus GN=ATP2A1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.520e-26 Identity = 75/170 (44.12%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG ATVG W+ + DG VTYSQLT++ +C SP F C+ F + MT++LSVLV IEM N+LN+LSE+ SL+ MPPWVN WL+ ++ +S LHFLILYV L IF + L WL+VL I+ PV+ +DE+LKFV R Sbjct: 843 VGAATVGAAAWWFLYAE--------DGPH-VTYSQLTHFMKCSEH-----SP--------DFEGVDCEVFEAPQ--PMTMALSVLVTIEMCNALNSLSENQSLVRMPPWVNIWLVGSIGLSMSLHFLILYVDPLPMIFKLQALDLYHWLMVLKISLPVIGLDEILKFVAR 988
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A2_RABIT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Oryctolagus cuniculus GN=ATP2A2 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26 Identity = 75/176 (42.61%), Postives = 97/176 (55.11%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNP------CDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG ATVG W+ + DG V++ QL+++ QC DNP C F MT++LSVLV IEM N+LN+LSE+ SLL MPPW N WL+ ++ +S LHFLILYV L IF I PL+ +WL+VL I+ PV+L+DE LKFV R Sbjct: 843 VGAATVGAAAWWF---------IAADGGPRVSFYQLSHFLQCKE-------------------DNPDFEGVDCAIFESPY--PMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVAR 988
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A2_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens GN=ATP2A2 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26 Identity = 75/176 (42.61%), Postives = 97/176 (55.11%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNP------CDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG ATVG W+ + DG V++ QL+++ QC DNP C F MT++LSVLV IEM N+LN+LSE+ SLL MPPW N WL+ ++ +S LHFLILYV L IF I PL+ +WL+VL I+ PV+L+DE LKFV R Sbjct: 843 VGAATVGAAAWWF---------IAADGGPRVSFYQLSHFLQCKE-------------------DNPDFEGVDCAIFESPY--PMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVAR 988
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A3_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Homo sapiens GN=ATP2A3 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.387e-26 Identity = 71/170 (41.76%), Postives = 102/170 (60.00%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG+ATV W+ + + +G + Y QL N+ +C + N +F D C+ F T++LSVLV IEM N+LN++SE+ SLL MPPW+NPWLL+A+++S LHFLIL VP L IF + PLS +W++VL I+ PV+L+DE LK++ R Sbjct: 844 VGLATVAAATWWFVYDA--------EGPHINFY-QLRNFLKC-----------SEDNPLFAGID--CEVFESRF--PTTMALSVLVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLSGRQWVVVLQISLPVILLDEALKYLSR 989
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A3_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus GN=Atp2a3 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.745e-25 Identity = 71/170 (41.76%), Postives = 100/170 (58.82%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG+ATV W+ + + +G VT+ QL N+ +C + N +F D C+ F T++LSVLV IEM N+LN++SE+ SLL MPPW+NPWLL A+ +S LHFLIL VP L IF + PLS +W +VL ++ PV+L+DE LK++ R Sbjct: 844 VGLATVAAATWWFLYDA--------EGPQ-VTFHQLRNFLKC-----------SEDNPLFAGID--CEVFESRF--PTTMALSVLVTIEMCNALNSVSENQSLLRMPPWLNPWLLGAVVMSMALHFLILLVPPLPLIFQVTPLSGRQWGVVLQMSLPVILLDEALKYLSR 989
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A3_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus GN=Atp2a3 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.090e-24 Identity = 70/170 (41.18%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG+ATV W+ + + +G VT+ QL N+ +C +P AG F T++LSVLV IEM N+LN++SE+ SLL MPPW+NPWLL A+ +S LHFLIL VP L IF + PLS +W +VL ++ PV+L+DE LK++ R Sbjct: 844 VGLATVAAATWWFLYDA--------EGPQ-VTFYQLRNFLKCSE-----DNPLFAGIDCKVFESR----------FPTTMALSVLVTIEMCNALNSVSENQSLLRMPPWLNPWLLGAVVMSMALHFLILLVPPLPLIFQVTPLSGRQWGVVLQMSLPVILLDEALKYLSR 989
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: AT2A3_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.423e-24 Identity = 69/170 (40.59%), Postives = 101/170 (59.41%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 512 VG+ATVG W+ + + +G V++ QL N+ +C T N +F + C+ F T++LSVLV IEM N+LN++SE+ SLL MPPW+N WLL A+ +S LHF ILYV + IF + PLS+ +W++VL I+ PV+L+DE LK++ R Sbjct: 844 VGLATVGAATWWFLYDA--------EGPQ-VSFHQLRNFMRC-----------TEDNPIFEGVN--CEIFESRY--PTTMALSVLVTIEMCNALNSVSENQSLLRMPPWLNIWLLGAIVMSMALHFFILYVKPMPLIFQVTPLSWPQWVVVLKISLPVILLDEGLKYLSR 989
BLAST of FC875709 vs. ExPASy Swiss-Prot
Match: ATC1_DUNBI (Cation-transporting ATPase CA1 OS=Dunaliella bioculata GN=CA1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.140e-24 Identity = 71/166 (42.77%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 3 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLK 500 VGI TV FI WY I+ G+ +T+SQLT++ C S P A + C+ FH T+S+SVLV +EMFN+LN LSED SLL +PPW N WL+ A++ S LHF ILY A +FG+ LSF EW +V+ ++ PV+L+DE++K Sbjct: 859 VGIVTVYGFIWWY-------ISFPEGGN--MTWSQLTHFQACAS------QPGGAKD---------CEVFHSKH--PTTISMSVLVVVEMFNALNNLSEDSSLLRIPPWDNKWLVGAIATSMALHFGILYTGASA-MFGVTGLSFAEWTMVIKLSAPVILVDEIMK 997 The following BLAST results are available for this feature:
BLAST of FC875709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875709 ID=FC875709; Name=FC875709; organism=Citrus clementina; type=EST; length=631bpback to top |