FC876162

Overview
NameFC876162
Unique NameFC876162
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length361
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10311 contig Ccv1_Contig10311:2..362. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.251e-15
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 1
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIG---FDVYFSMARG 342
            +H +G+PR+G  RELK ALE++W G      L+ V   LR++ W+   EAGI+ +P   F++YDQVL  +  LG +P R++      G    D  F+MARG
Sbjct:    4 AHNLGFPRIGADRELKKALEAYWKGDLDQTGLRAVGQQLRAAHWQVQKEAGIELLPVGDFAWYDQVLTHSLTLGVIPERFSPAQDAAGLPTLDTLFAMARG 104          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BURP8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.251e-15
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 1
Query:   43 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNAS 351
            + +H +G+PR+G  RELKFALE +W G+SS  +L+ V A LR+  W+   +A + + P   F++YDQVLD +  LG +P R     G+   D  F +ARG ++
Sbjct:    2 VTTHNLGFPRIGAHRELKFALEKYWKGESSRAELKAVGAQLRARHWQ--DQARLDFSPVGDFAFYDQVLDMSFTLGNLPERVRGFHGD-ALDNAFRVARGRSA 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACHK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACCZ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACCQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain Q1) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K   E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKIDEEQFLTTMKEIRLKHVKAQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACC7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain AH187) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K   E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKIDEEQFLTTMKEIRLKHVKAQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACC3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain 03BB102) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACC1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K   E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKIDEEQFLTTMKEIRLQHVKAQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACC0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain AH820) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BACAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.840e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   58 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 345
            +GYPR+G +RE K  LE+FW  K + E       ++R    K   E GI+ IP   F+YYD VLDT  MLG +P R++     +  DVYF+MARG+
Sbjct:    8 LGYPRIGLQREWKKTLEAFWSNKINEEQFLTTMKEIRLQHVKVQQEKGIELIPIGDFTYYDHVLDTAYMLGFIPSRFSEFTSYL--DVYFAMARGS 101          
The following BLAST results are available for this feature:
BLAST of FC876162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_PSESM2.251e-1540.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP82.251e-1540.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHK3.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCZ3.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCQ3.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC73.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC33.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC13.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC03.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAN3.840e-1543.755-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32001A06EF DevOvary1 Citrus clementina cDNA clone C32001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876162 ID=FC876162; Name=FC876162; organism=Citrus clementina; type=EST; length=361bp
CTCGACTCTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATC
TCACATCGTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCG
CGTTGGAATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAG
GTGTCCGCTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGG
GATCAAATACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCG
ACACCACCGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGC
GGCGAGATTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTC
TGTTCCCGCTA
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