FC876163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.237e-59 Identity = 120/212 (56.60%), Postives = 144/212 (67.92%), Query Frame = 1 Query: 106 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCC--DGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 GSA CG G +CPGG CCS+FGWCG T D+C +GCQS C+ G+ GD G L +I+RE F+ +L +RND CPAR FYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT HETTG GW AP G Y WGYC+NRE+ A DYC DPNYPC GK Y+GRGP+QLTW +Y +CG + G DLL +PDLLA Sbjct: 19 GSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCS-----------GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAI--GVDLLNNPDLLA 214
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.110e-58 Identity = 117/214 (54.67%), Postives = 140/214 (65.42%), Query Frame = 1 Query: 106 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLL 705 GSA CG +CPGG CCS +GWCG T+D+C GCQS C+ G+ CD D GDG G L II + F+ LL++RND RCPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HETTGGWPDAP G YAWGYC+ +E+ YCDP NY C GK Y GRGPIQL+W +Y CG+ L LL+ P+L+ Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKL--PLLQEPELV 229
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.450e-58 Identity = 110/208 (52.88%), Postives = 140/208 (67.31%), Query Frame = 1 Query: 106 GSAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 GSA CG G VCPGG CCS+FGWCG T D+C GCQS C+ G++G++I+R MF D+L++RN+ CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYC+ RE G+ + YC P+ +PC KYYGRGPIQ+++ +Y + G+ + G DL+ +PDL+A Sbjct: 18 GSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAI--GVDLVNNPDLVA 207
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.400e-58 Identity = 119/211 (56.40%), Postives = 141/211 (66.82%), Query Frame = 1 Query: 106 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCC-DGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 GSA CG G +CPGG CCS+FGWCG T D+C GCQS C+ G A G L +ISRE F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QL+W +Y +CG + G DLL +PDLL+ Sbjct: 20 GSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI--GVDLLNNPDLLS 217
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.228e-57 Identity = 109/208 (52.40%), Postives = 134/208 (64.42%), Query Frame = 1 Query: 103 GGSAGN-CG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 GGS G CG G +CPGG CCS+FGWCG T D+C GCQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ++W +Y +CG + G DLL PDL+A Sbjct: 23 GGSYGEQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAI--GVDLLNKPDLVA 217
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 6.093e-57 Identity = 105/205 (51.22%), Postives = 134/205 (65.37%), Query Frame = 1 Query: 109 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 SA CG+ G +CPGG CCS+FGWCG T ++C DGCQS C+ G++G GG L +IS + F ++L++RND C + FYTYDAF+ AAKAFP F N G+ +KREIAAF QT HETTGGWP AP G YAWGYCF RE ++ +PC +YYGRGPIQ++W +Y +CG + G DLL +PDL+A Sbjct: 19 SAEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAI--GVDLLNNPDLVA 209
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.039e-56 Identity = 108/208 (51.92%), Postives = 133/208 (63.94%), Query Frame = 1 Query: 103 GGSAGN-CG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 GGS G CG G +CPGG CCS+FGWCG T D+C CQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ++W +Y +CG + G DLL PDL+A Sbjct: 22 GGSYGEQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCG-----------GPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAI--GVDLLNKPDLVA 216
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56 Identity = 115/205 (56.10%), Postives = 137/205 (66.83%), Query Frame = 1 Query: 115 GNCGSGVVCPGGECCSRFGWCGLTIDHCC-DGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 G G +CPGG CCS+FGWCG T D+C GCQS C+ G A G L +ISRE F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QL+W +Y +CG + G DLL +PDLL+ Sbjct: 4 GRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI--GVDLLNNPDLLS 195
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 219.164 bits (557), Expect = 1.773e-56 Identity = 109/208 (52.40%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 109 SAGNCG---SGVVCPGGECCSRFGWCGLTIDHCCD-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 SA CG G +CP G CCS FGWCG T +C GCQS +C P G G+L IIS F+D+L++RND CPAR FYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYCF +E A SDYC+P+ +PC +YYGRGP+QL+W +Y CG + G DLL +PDL+A Sbjct: 32 SAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQS--------QCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAI--GVDLLNNPDLVA 228
BLAST of FC876163 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.024e-56 Identity = 113/208 (54.33%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 109 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWKLHYLRCGEGLGRGEDLLKHPDLLA 708 SA CGS G CP G CCS+FGWCG T D+C G CQS C G P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ++ +Y CG + G DLL +PDL+A Sbjct: 22 SAEQCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQCP----GGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLVA 222 The following BLAST results are available for this feature:
BLAST of FC876163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876163 ID=FC876163; Name=FC876163; organism=Citrus clementina; type=EST; length=713bpback to top |