FC876168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35 Identity = 62/104 (59.62%), Postives = 81/104 (77.88%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 KKG WT EED+IL Y+ +G G W + + GL RCGKSCRLRW+NYL ++ +GN T +EE++II+LH LGNRWSLIA +PGRTDN++KNYWN+HLS+K+ Sbjct: 15 KKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.906e-35 Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 3 Query: 165 MGRAPC-CEKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSR 506 M + PC + V ++KG WT EED IL YI +GEG W SL ++AGL R GKSCRLRW+NYLR D++RGNIT EE+ +I++LHA GNRWS IA +PGRTDNEIKNYW + + + Sbjct: 1 MDKKPCNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQK 115
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 60/105 (57.14%), Postives = 81/105 (77.14%), Query Frame = 3 Query: 195 GLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 GL+KG WT EED +L + I GEG W +P AGL RC KSCRLRW+NYL+ +KRG ++++E +++++LH LGNRWSLIA +PGRT N++KNYWN+HLS+K Sbjct: 7 GLRKGAWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 61/105 (58.10%), Postives = 81/105 (77.14%), Query Frame = 3 Query: 195 GLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 GL+KG WTAEED +L + I GEG W +P AGL RC KSCRLRW+NYL+ +KRG +++E +++++LH LGNRWSLIA +PGRT N++KNYWN+HLS+K Sbjct: 7 GLRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 3 Query: 165 MGRAPC-CEKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 M + PC V ++KG WT EED IL +I +GEG W ++ ++AGL R GKSCRLRW+NYLR D++RGNIT EE+ +I++LHA GNRWS IA ++PGRTDNEIKNYWN Sbjct: 1 MDKKPCNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWN 110
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 61/105 (58.10%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 195 GLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 GL+KG WTAEED +L I GEG W +P AGL RC KSCRLRW+NYL+ +KRG ++ +E +++++LH LGNRWSLIA +PGRT N++KNYWN+HLS+K Sbjct: 7 GLRKGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 59/104 (56.73%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 +K+G W EED IL Y++ +GEG+W + + +GL R GKSCRLRW NYLR ++KRG+++ +E+++II++H LGNRWSLIA +PGRTDNE+KNYWN+HL++K Sbjct: 12 VKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKI 512 ++KG WT EED IL YI +G+G W SL K+AGL R GKSCRLRW+NYLR D++RGNIT EE+ II++LHA GNRWS IA ++PGRTDNEIKN+W + + + I Sbjct: 20 VRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYI 124
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 165 MGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRK 509 MG +P GL+KG WT EED +L + I GEG W +P GL RC KSCRLRW+NYL+ +KRG + ++E +++++LH LGNRWSLIA +PGRT N++KNYWN+HLS+K Sbjct: 1 MGESP----KGLRKGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of FC876168 vs. ExPASy Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 75/154 (48.70%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 165 MGRAPCCEKVG---LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWNSHLSRKIHTFW-RPSSEKTLPVKVDVAAAGTGVASDRKAGKK 614 MGR P VG ++KG W+ EED+ L +I +G G W S+P+ A L RCGKSCRLRWINYLR DLKRG + +EE+ I+ LH LGNRWS IAS++PGRTDNEIKN+WNS + +K+ P++ K + D A A + + +K Sbjct: 1 MGR-PSSGAVGQPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPM-ASADTATAAAALPDAEEEDRK 152 The following BLAST results are available for this feature:
BLAST of FC876168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876168 ID=FC876168; Name=FC876168; organism=Citrus clementina; type=EST; length=720bpback to top |