FC876172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 K+GINGFGRIGR+ ND ID +YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + WG GVD VE++G+F GAK Sbjct: 4 KIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHGRFDGTVEV-KDGNLVVNGKTIRVTAERDPANLNWGAIGVDIAVEATGLFLTDETARKHITAGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 56/123 (45.53%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 K+GINGFGRIGRL NDPFI YM YMFKYDS HG +K + V D+ TL K + VF +R+P EIP G +Y+VES+GVF GGAK IS+ S Sbjct: 5 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGAWKHHELKVKDEKTLLFGEKPVVVFGRRNPEEIPRASTGAEYIVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 52/93 (55.91%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 454 NDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 NDPFID YM YMFKYDS HG F+G ++ D L INGK I VF++RDPA IPWG G YVVES+GVF GGAK IS+ S Sbjct: 12 NDPFIDLDYMVYMFKYDSVHGRFEGEVST-KDGKLVINGKAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPS 103
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KVGINGFGRIGR+ ND +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F GAK Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KVGINGFGRIGR+ ND +DA+YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F GAK Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.288e-20 Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F GAK Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20 Identity = 52/93 (55.91%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 454 NDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 +DPFID +YM YMFKYDS HG FKGT+ + D L I+G I VF +RDPA I WG G DYVVESSGVF GGAK IS+ S Sbjct: 12 SDPFIDLQYMVYMFKYDSVHGRFKGTVEI-KDGKLVIDGHPITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPS 103
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20 Identity = 54/122 (44.26%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 K+GINGFGRIGRL ND + A +AY+FKYDSTHG + GT+ V + + I+ + I FS+R+PA++PWGD G DYVVES+G+F GAK IS+ S Sbjct: 3 KIGINGFGRIGRLVARIAMANPQVTLVGIND-LVPASNLAYLFKYDSTHGSYGGTV-VAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPS 122
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20 Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F GAK Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20 Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E++G+F GAK Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAK 115 The following BLAST results are available for this feature:
BLAST of FC876172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876172 ID=FC876172; Name=FC876172; organism=Citrus clementina; type=EST; length=740bpback to top |