FC876172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.056e-18 Identity = 51/121 (42.15%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 TKV INGFGRIGRL ND DAK +A++FKYDS+ G F G I V + + + +NGK +KVF++ DP ++PWG+ G+D V+E +G F GAK IS+ Sbjct: 2 TKVAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRFNGEIEVKEGAFV-VNGKEVKVFAEADPEKLPWGELGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISA 120
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.056e-18 Identity = 53/127 (41.73%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 328 PPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 PP +QK + VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG + + L ++ I + +DP EIPW G YVVE +GV+ GA+ Sbjct: 98 PPPLQKPARE--LTVGINGFGRIGRLVLRVCMEKGIRVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGNVE-HKNGQLVVDNLEINTYQCKDPKEIPWSSIGNPYVVECTGVYLSIEAASAHISSGAR 220
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.056e-18 Identity = 49/121 (40.50%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 TK+GINGFGRIGR ND DAK +A++ KYD+ HG ++ +++++ +NGK IKV ++RDPA++PW DYGV+ VVES+G F G K IS+ Sbjct: 2 TKIGINGFGRIGRNVFRAALNNSEVEVVAIND-LTDAKTLAHLLKYDTVHGTLNAEVSA-NENSIVVNGKEIKVIAERDPAQLPWSDYGVEVVVESTGRFTKKSDAEKHLGGSVKKVIISA 120
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.738e-18 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVF 663 V INGFGRIGRL NDPF+ YM YM +YD+ HG F G+++ D++ + +NGK I+VF++ +P I WG+ V YVVES+G F Sbjct: 3 VAINGFGRIGRLVLRASAKNPLINIVAINDPFVSTTYMEYMLEYDTVHGKFDGSLSH-DETHIFVNGKPIRVFNEMNPENIKWGEEQVQYVVESTGAF 99 HSP 2 Score: 22.3274 bits (46), Expect = 2.738e-18 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 701 VQKVGISAPSADA 739 V+KV ISAPS+DA Sbjct: 113 VEKVVISAPSSDA 125
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_CLOAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium acetobutylicum GN=gap PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.508e-18 Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 K+ INGFGRIGRL ND DAK +A++FKYDS+ G F G I V + + + +NGK +KVF++ DP ++PWGD G+D V+E +G F GAK IS+ Sbjct: 3 KIAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRFNGEIEVKEGAFV-VNGKEVKVFAEADPEKLPWGDLGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISA 120
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.581e-18 Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 316 ATEIPPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 AT P + +R VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG++ + L ++ I V+ ++P +IPW G YVVES+GV+ GA+ IS+ S Sbjct: 63 ATPPPKMVSVARE---LTVGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGSVE-FRNGQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPS 196
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18 Identity = 51/122 (41.80%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 298 QPIRATATEIPPTIQKSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVF 663 +PI+ PP + VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG + L ++ I VF + P EIPW G +VVE++GV+ Sbjct: 41 EPIKEEVPPPPPPPPAPKKVRELIVGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDLEYMVYMFKYDSTHGRYKGNVE-HKKGQLVVDNNEISVFQCKQPKEIPWKSVGSPFVVEATGVY 160
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 89.7373 bits (221), Expect = 1.741e-17 Identity = 51/120 (42.50%), Postives = 63/120 (52.50%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KVGINGFGRIGRL ND + +AY+ KYDSTHG + + DD + I+G I S R+PAE+PWG G DYVVES+G+F GAK IS+ Sbjct: 5 KVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLRSQVEAKDDGIV-IDGHFIPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISA 122
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17 Identity = 52/132 (39.39%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXN----DPFIDAKYMAYMFKYDSTHGVFKGTIN-------VVDDSTLEING-KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 KVGINGFGRIGR+ D DA+Y AY KYDS HG FK +++ V D TL +NG +++ V ++R+PA++PWG GV+YV+ES+G+F GGA+ IS+ Sbjct: 4 KVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHSVSTTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISA 135
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_BACME (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus megaterium GN=gap PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17 Identity = 50/120 (41.67%), Postives = 65/120 (54.17%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISS 726 K+GINGFGRIGR ND DA +A++ KYDS HG + VVD S L +NGK I++ ++RDPA++ WG GV+ VVES+G F GAK IS+ Sbjct: 4 KIGINGFGRIGRNVFRAALKNDNVEVVAIND-LTDANMLAHLLKYDSVHGKLDAEV-VVDGSNLVVNGKTIEISAERDPAQLSWGKQGVEIVVESTGFFTKRADAAKHLEAGAKKVIISA 121 The following BLAST results are available for this feature:
BLAST of FC876172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876172 ID=FC876172; Name=FC876172; organism=Citrus clementina; type=EST; length=740bpback to top |