FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10304 contig Ccv1_Contig10304:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOUT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain UTI89 / UPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOSM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOSE (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain SE11) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOLU (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOLI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain K12) GN=hemL PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOLC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOL6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O6 GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOL5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOK1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O1:K1 / APEC GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOHS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O9:H4 (strain HS) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ECOUT2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOSM2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOSE2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOLU2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOLI2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOLC2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOL62.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOL52.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOK12.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOHS2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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