FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECODH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain K12 / DH10B) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECOBW (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain K12 / BW2952) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO8A (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O8 (strain IAI1) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO81 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O81 (strain ED1a) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO7I (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO5E (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO57 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O157:H7 GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO55 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain 55989 / EAEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO45 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
[Close]
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO27 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ECODH2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOBW2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO8A2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO812.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO7I2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO5E2.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO572.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO552.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO452.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO272.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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