FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10304 contig Ccv1_Contig10304:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ECO24 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 89/161 (55.28%), Postives = 118/161 (73.29%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_YERE8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 90/161 (55.90%), Postives = 119/161 (73.91%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  +  AK+L+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP ++GH    +  A+ E +++G SFGAP  +E  +AE+V + VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSESLYAQAKQLIPGGVNSPVRAFTGVGGVPLFIERADGAYLFDVDGKAYIDYVGSWGPMVLGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAELVTNLVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_THISH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 92/162 (56.79%), Postives = 115/162 (70.99%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  S + F  A+  +PGGVNSPVRAFK VGG P+     +G++M+D DG  YIDYVGSWGP I GHA  +V+ A+ E  + G SFGAP  +E  +AE V   VPS++MVR V+SGTEA M  +RLAR FTGR++I +FEGCYHGH D  LVKAGSG  TLG+
Sbjct:    1 MTRSHDLFKAAQRHIPGGVNSPVRAFKGVGGDPVFIQRAEGAYMYDADGKRYIDYVGSWGPMIAGHAHPEVVEAVREAARGGLSFGAPTEIEIRMAERVCELVPSMDMVRMVSSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHGDSLLVKAGSGALTLGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PELPD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pelobacter propionicus (strain DSM 2379) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 94/159 (59.12%), Postives = 112/159 (70.44%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S   F  A++ +PGGVNSPVRAFKSVG  P+   S  G  + D+DGN +IDYVGSWGP I+GH   QV+ A+ +    G SFGAP   E  LA MVI AVPSIEMVR V+SGTEA M  +RLAR +TGR+ I +F GCYHGHAD  LV+AGSG AT G+
Sbjct:    6 SSALFQQARQSIPGGVNSPVRAFKSVGSDPLFIQSASGCTITDVDGNTFIDYVGSWGPMIVGHCHPQVVEAVRQAAGSGASFGAPTEREITLANMVIDAVPSIEMVRMVSSGTEATMSAIRLARGYTGRDNIIKFSGCYHGHADSLLVRAGSGAATFGI 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PASMU (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pasteurella multocida GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 94/161 (58.39%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  S   F  A+  +PGGVNSPVRAFK VGG PI  +  +G++++D +GN+YIDYVGSWGP I+GH    +L A+  T + G SFGAP  LE  LAE+V S VPSI+MVR V+SGTEA M  +RLAR +T R++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTTSLSLFQRAQHRIPGGVNSPVRAFKGVGGTPIFIEKAQGAYLYDTEGNQYIDYVGSWGPMILGHNHPTILDAVISTAQNGLSFGAPTALEIELAELVCSLVPSIDMVRMVSSGTEATMSAIRLARGYTKRDKIIKFEGCYHGHADSLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_MOOTA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Moorella thermoacetica (strain ATCC 39073) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 95/160 (59.38%), Postives = 122/160 (76.25%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK-GTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S  AF  A +LMPGGVNSPVRAFKSVG  P      +G++++DIDG++YIDYV SWGP I+GH   +V+ AL +T+++ GTSFGAP  LEN LA  + +A+P++EMVR VNSGTEA M  LRLAR +TGRE++ +F GCYHGHAD FL++AGSG  T G+
Sbjct:   10 SAAAFAEAVKLMPGGVNSPVRAFKSVGLTPPFIQRGEGAYLYDIDGHKYIDYVSSWGPLILGHRHPEVVDALEKTLREMGTSFGAPTELENELAREITTAMPAVEMVRLVNSGTEATMSALRLARGYTGREKVVKFAGCYHGHADYFLIQAGSGALTFGI 169          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_LACRJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Lactobacillus reuteri (strain JCM 1112) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 94/159 (59.12%), Postives = 121/159 (76.10%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S+ AF  A++ MPGGVNSPVRAFK+VGG P+  D  K  +++DIDGN+YIDYV SWGP I+GHADD V+A L + + KGTS+GAP L E  LA++V   +PSIEM+R V+SGTEA M  +RLAR +T R++I +F G YHGH+D  LV AGSG+AT G+
Sbjct:    9 SKIAFKEAQKYMPGGVNSPVRAFKNVGGDPLFIDHGKDEYIYDIDGNKYIDYVLSWGPLILGHADDHVVAELDKAVAKGTSYGAPTLQETELAKIVNKIMPSIEMIRMVSSGTEATMSAIRLARGYTHRKKIVKFVGNYHGHSDSLLVDAGSGLATFGI 167          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_LACRD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Lactobacillus reuteri (strain DSM 20016) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 94/159 (59.12%), Postives = 121/159 (76.10%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S+ AF  A++ MPGGVNSPVRAFK+VGG P+  D  K  +++DIDGN+YIDYV SWGP I+GHADD V+A L + + KGTS+GAP L E  LA++V   +PSIEM+R V+SGTEA M  +RLAR +T R++I +F G YHGH+D  LV AGSG+AT G+
Sbjct:    9 SKIAFKEAQKYMPGGVNSPVRAFKNVGGDPLFIDHGKDEYIYDIDGNKYIDYVLSWGPLILGHADDHVVAELDKAVAKGTSYGAPTLQETELAKIVNKIMPSIEMIRMVSSGTEATMSAIRLARGYTHRKKIVKFVGNYHGHSDSLLVDAGSGLATFGI 167          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_GEOBB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 94/159 (59.12%), Postives = 114/159 (71.70%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S + F  A + +PGGVNSPVRAF+SVG  P+      G  ++D DGN +IDYVGSWGP I+GH   QV++A+   +  G SFGAP  LE  LAEMVI AVPSIEMVR V+SGTEA M  +RLAR +TGR+ I +F GCYHGH+D  LVKAGSG AT G+
Sbjct:    6 STKLFQQALQSIPGGVNSPVRAFRSVGSDPLFIKKAAGPRIYDEDGNAFIDYVGSWGPMILGHCHPQVVSAIKAAVDNGASFGAPTELEITLAEMVIDAVPSIEMVRMVSSGTEATMSAIRLARGYTGRDNILKFSGCYHGHSDSLLVKAGSGAATFGV 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_GEMAT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 94/159 (59.12%), Postives = 114/159 (71.70%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S E    A+   PGGVNSPVRAF+ VGG+P V    KG+ +WD+DGNEY DYV SWGP ++GHA D VL A+ + M +GTSFG P   E  LA+ +   +P +EMVRF +SGTEA M + RLARA T RE I +F+GCYHGH D FLV+AGSGVATLGL
Sbjct:   10 SAEIMARARMRFPGGVNSPVRAFRGVGGEPFVAARGKGARIWDVDGNEYFDYVLSWGPLVLGHAPDVVLHAVSQAMLEGTSFGMPTAREVELADAIAGRMPHLEMVRFTSSGTEATMSIARLARAVTKREHILKFDGCYHGHGDSFLVRAGSGVATLGL 168          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ECO242.663e-4955.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_YERE83.479e-4955.90Glutamate-1-semialdehyde 2,1-aminomutase OS=Yersin... [more]
GSA_THISH3.479e-4956.79Glutamate-1-semialdehyde 2,1-aminomutase OS=Thioal... [more]
GSA_PELPD3.479e-4959.12Glutamate-1-semialdehyde 2,1-aminomutase OS=Peloba... [more]
GSA_PASMU3.479e-4958.39Glutamate-1-semialdehyde 2,1-aminomutase OS=Pasteu... [more]
GSA_MOOTA3.479e-4959.38Glutamate-1-semialdehyde 2,1-aminomutase OS=Moorel... [more]
GSA_LACRJ3.479e-4959.12Glutamate-1-semialdehyde 2,1-aminomutase OS=Lactob... [more]
GSA_LACRD3.479e-4959.12Glutamate-1-semialdehyde 2,1-aminomutase OS=Lactob... [more]
GSA_GEOBB3.479e-4959.12Glutamate-1-semialdehyde 2,1-aminomutase OS=Geobac... [more]
GSA_GEMAT3.479e-4959.12Glutamate-1-semialdehyde 2,1-aminomutase OS=Gemmat... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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