FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ANASP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabaena sp. (strain PCC 7120) GN=hemL PE=3 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 8.805e-69
Identity = 126/167 (75.45%), Postives = 144/167 (86.23%), Query Frame = 2
Query:  203 NFTLKN--SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            N T+K   S+E F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG+++WD+DGN+YIDYVG+WGPAI GHA   V+ AL + ++KGTSFGAP  LENVLAEMVI+AVPSIEMVRFVNSGTEACM VLRL RAFT RE++ +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    3 NTTIKTTKSQEIFAAAQNLMPGGVSSPVRAFKSVGGQPIVFDHVKGAYIWDVDGNQYIDYVGTWGPAICGHAHPDVIGALHDALEKGTSFGAPSFLENVLAEMVIAAVPSIEMVRFVNSGTEACMAVLRLMRAFTNREKVIKFEGCYHGHADMFLVKAGSGVATLGL 169          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SYNS9 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9902) GN=hemL PE=3 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.150e-68
Identity = 122/159 (76.73%), Postives = 139/159 (87.42%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S+  F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG + WD+DGN+YIDY+GSWGPAI GHA  +V++AL E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++ +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    6 SQAIFGAAQGLMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDVDGNKYIDYIGSWGPAICGHAHPEVISALQEAIEKGTSFGAPCALENTLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGL 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SYNR3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain RCC307) GN=hemL PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.150e-68
Identity = 120/159 (75.47%), Postives = 140/159 (88.05%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S+  F  A++LMPGGVNSPVRAF+SVGGQPIVFD V+G++ WD+DGN YIDY+GSWGPAI GHA+ +V+ AL + + KGTSFGAPC LEN LAEMVI+AVPS+EMVRFVNSGTEACM VLRL RA+TGRE++ +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:   12 SDALFTAAQQLMPGGVNSPVRAFRSVGGQPIVFDRVEGAYAWDVDGNRYIDYIGSWGPAICGHANPEVIEALQQALTKGTSFGAPCALENTLAEMVINAVPSVEMVRFVNSGTEACMAVLRLMRAYTGREKVIKFEGCYHGHADMFLVKAGSGVATLGL 170          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SYNPX (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain WH8102) GN=hemL PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.150e-68
Identity = 122/159 (76.73%), Postives = 139/159 (87.42%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S+  F  A+ LMPGGV+SPVRAFKSVGGQPIVFD VKG + WD+DGN+YIDY+GSWGPAI GHA  +V++AL E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++ +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    6 SQAIFGAAQGLMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDVDGNKYIDYIGSWGPAICGHAHPEVISALQEAIEKGTSFGAPCALENTLAEMVIDAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGL 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PROMA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus GN=hemL PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.502e-68
Identity = 122/164 (74.39%), Postives = 141/164 (85.98%), Query Frame = 2
Query:  206 FTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            F   NS+  F+ A+ELMPGGV+SPVRAFKSV G PIVFD VKG++ WD+DGN +IDYVGSWGPAI GH+  +V+A+L E ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++ +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    5 FNTSNSQAVFHAAQELMPGGVSSPVRAFKSVNGDPIVFDRVKGAYAWDLDGNRFIDYVGSWGPAICGHSHPEVIASLQEALEKGTSFGAPCELENKLAEMVIEAVPSVEMVRFVNSGTEACMAVLRLMRAFTGRDKLIKFEGCYHGHADMFLVKAGSGVATLGL 168          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SYNP6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemL PE=1 SV=4)

HSP 1 Score: 258.84 bits (660), Expect = 1.962e-68
Identity = 125/164 (76.22%), Postives = 140/164 (85.37%), Query Frame = 2
Query:  206 FTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            F    S+E F  A++LMPGGV+SPVRAFKSVGGQPIVFD VK ++ WD+DGN YIDYVG+WGPAI GHA  +V+ AL   M+KGTSFGAPC LENVLAEMVI AVPSIEMVRFVNSGTEACM VLRL RA+TGR++I +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    7 FKTIKSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVIDAVPSIEMVRFVNSGTEACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGL 170          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SYNE7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus elongatus (strain PCC 7942) GN=hemL PE=1 SV=3)

HSP 1 Score: 258.84 bits (660), Expect = 1.962e-68
Identity = 125/164 (76.22%), Postives = 140/164 (85.37%), Query Frame = 2
Query:  206 FTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            F    S+E F  A++LMPGGV+SPVRAFKSVGGQPIVFD VK ++ WD+DGN YIDYVG+WGPAI GHA  +V+ AL   M+KGTSFGAPC LENVLAEMVI AVPSIEMVRFVNSGTEACM VLRL RA+TGR++I +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    7 FKTIKSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVIDAVPSIEMVRFVNSGTEACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGL 170          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_CYAP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain PCC 7424) GN=hemL PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.962e-68
Identity = 122/165 (73.94%), Postives = 142/165 (86.06%), Query Frame = 2
Query:  203 NFTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +F    SEE F  A++LMPGGV+SPVRAFKSVGGQPIVFD V+G+++WD+D N+YIDYVG+WGPAI GHA   V++AL + + KGTSFGAPC+ EN+LAEMVI AVPSIEMVRFVNSGTEACM VLRL RA+T RE+I +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    6 SFKTTKSEEIFTAAQKLMPGGVSSPVRAFKSVGGQPIVFDHVEGAYIWDVDNNQYIDYVGTWGPAICGHAHPDVISALHKALDKGTSFGAPCMQENILAEMVIDAVPSIEMVRFVNSGTEACMSVLRLMRAYTNREKIIKFEGCYHGHADMFLVKAGSGVATLGL 170          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PROM3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemL PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.454e-68
Identity = 120/159 (75.47%), Postives = 140/159 (88.05%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S+  F+ A+ LMPGGV+SPVRAF+SVGGQPIVFD VKG++ WD+DGN +IDY+GSWGPAI GHA  +V+AAL + ++KGTSFGAPC LEN LAEMVI AVPS+EMVRFVNSGTEACM VLRL RAFTGR+++ +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    6 SQAIFSAAQRLMPGGVSSPVRAFRSVGGQPIVFDRVKGAYAWDVDGNRFIDYIGSWGPAICGHAHPEVIAALQDALEKGTSFGAPCELENQLAEMVIDAVPSVEMVRFVNSGTEACMSVLRLMRAFTGRDKLIKFEGCYHGHADMFLVKAGSGVATLGL 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SYNJB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. GN=hemL PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.169e-67
Identity = 118/165 (71.52%), Postives = 140/165 (84.85%), Query Frame = 2
Query:  203 NFTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +F    S++ F  A+ LMPGGV+SPVRAFKSVGG P+VFD V G++ WD+DGN+YIDY+GSWGPAI+GHA  +V+ AL   ++KGTSFGAPC+LEN LAE VI AVPS+EMVRFVNSGTEACM VLRL RA+TGRE++ +FEGCYHGHAD FLVKAGSGVATLGL
Sbjct:    9 SFNTTRSKQVFARAQSLMPGGVSSPVRAFKSVGGDPVVFDRVSGAYAWDVDGNQYIDYIGSWGPAIVGHAHPEVIEALRRALEKGTSFGAPCVLENELAERVIEAVPSVEMVRFVNSGTEACMAVLRLMRAYTGREKVIKFEGCYHGHADMFLVKAGSGVATLGL 173          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ANASP8.805e-6975.45Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabae... [more]
GSA_SYNS91.150e-6876.73Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNR31.150e-6875.47Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNPX1.150e-6876.73Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_PROMA1.502e-6874.39Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_SYNP61.962e-6876.22Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNE71.962e-6876.22Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_CYAP71.962e-6873.94Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_PROM37.454e-6875.47Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_SYNJB2.169e-6771.52Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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