FC876179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEA7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas aeruginosa (strain PA7) GN=hemL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47 Identity = 89/162 (54.94%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 + SE F+ A++ +PGGVNSPVRAFKSVGG P+ F +G+++ D D Y+DYVGSWGP I+GH+ VL A+ + G S+GAP LE +A++V + VPS+EMVR V+SGTEA M +RLAR +TGR+ I +FEGCYHGH+D LVKAGSG T G+ Sbjct: 1 MSRSETLFSNAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVLDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRRQLDHGLSYGAPTALEVEMADLVCAMVPSMEMVRMVSSGTEATMSAIRLARGYTGRDSIIKFEGCYHGHSDSLLVKAGSGALTFGV 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_MARMS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Marinomonas sp. (strain MWYL1) GN=hemL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47 Identity = 90/162 (55.56%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 + SE+ + A+ +PGGVNSPVRAF VGG PI F +G++++D D YIDYVGSWGP I+GH+ VL A+ + + G SFGAP +E +AE V VPS++MVR VNSGTEA M +RLAR +TGR++I +FEGCYHGH+D LVKAGSG TLG+ Sbjct: 1 MSRSEDLYARAQHRIPGGVNSPVRAFNGVGGTPIFFQRGEGAYVYDEDKKRYIDYVGSWGPMILGHSHPDVLDAVRQQLDFGLSFGAPTEVEITMAEKVCELVPSMDMVRMVNSGTEATMSAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGALTLGV 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_LEPCP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=hemL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47 Identity = 88/161 (54.66%), Postives = 115/161 (71.43%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + ++ E F A+ +PGGVNSPVRAF++VGG P +G++MWD +G +YIDY+GSWGP I+GH VLAA+ + +G SFGAP E LAE +++ VPS E +R V+SGTEA M +RLAR TGR ++ +FEGCYHGHAD LVKAGSG+AT G Sbjct: 5 VSSNAELFERAQRSIPGGVNSPVRAFRAVGGTPRFIARAQGAYMWDAEGKQYIDYIGSWGPMILGHGHPAVLAAVQKAATEGFSFGAPTEREVELAETILALVPSCEQIRLVSSGTEAAMSAIRLARGATGRSKLIKFEGCYHGHADALLVKAGSGLATFG 165
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ERWCT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Erwinia carotovora subsp. atroseptica GN=hemL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47 Identity = 87/161 (54.04%), Postives = 115/161 (71.43%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + SE + A++L+PGGVNSPVRAF VGG P+ + G++++D+D YIDYVGSWGP ++GH + A+ ++G SFGAP +E +A +V S VPS++MVR VNSGTEA M +RLAR +TGR++I +FEGCYHGHAD LVKAGSG TLG Sbjct: 1 MNKSESLYAAAQQLIPGGVNSPVRAFNGVGGTPLFIERADGAYLYDVDEQAYIDYVGSWGPMVLGHNHPSIRDAVIAAAERGLSFGAPTEMEVQMARLVTSLVPSMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DESPS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfotalea psychrophila GN=hemL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47 Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = 2 Query: 221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 S++ F AK+++PGGVNSPVRA SVG P+ + +GS+++D DG +Y+D+V SWGP I+GHA ++ A+ + GTS+GAP E LA MV+ AVPSIE VRFV+SGTEA M +RLAR +TG+ I +F+GCYHGHAD FLVKAGSGV TLG+ Sbjct: 6 SKKLFAEAKKVIPGGVNSPVRACLSVGCDPLFIERAEGSYIYDADGQKYLDFVNSWGPMIMGHAHPDIIKAIQDAAVYGTSYGAPTSSEVDLASMVVEAVPSIEKVRFVSSGTEATMSAVRLARGYTGKNVIVKFDGCYHGHADSFLVKAGSGVLTLGI 164
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SHELP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=hemL PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.252e-47 Identity = 91/161 (56.52%), Postives = 113/161 (70.19%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + SE F AK+ +PGGVNSPVRAF VGG P + G++++D DG YIDYVGSWGP I+GH ++ A+ + ++ G SFGAP LE +AE VI VPS+E VR V+SGTEA M +RLAR FT R++I +FEGCYHGHAD LVKAGSG TLG Sbjct: 1 MTRSETLFEQAKKTIPGGVNSPVRAFNGVGGSPRFIEKADGAYIYDADGKAYIDYVGSWGPMILGHNHPKIRQAVLDAVENGLSFGAPTELEVRMAEKVIEMVPSMEQVRMVSSGTEATMSAIRLARGFTNRDKILKFEGCYHGHADCLLVKAGSGALTLG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEP1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hemL PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.252e-47 Identity = 88/162 (54.32%), Postives = 118/162 (72.84%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 + SE F A++ +PGGVNSPVRAFKSVGG P+ F +G+++ D D Y+DYVGSWGP I+GH VL ++ + ++ G S+GAP +E +A++V S VPS+EMVR V+SGTEA M +RLAR +TGR+ I +FEGCYHGH+D LVKAGSG+ T G+ Sbjct: 1 MSRSEALFAQAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVVDEDDKRYVDYVGSWGPMILGHGHPDVLDSVRKQLEHGLSYGAPTAMETEMADLVCSIVPSMEMVRMVSSGTEATMSAIRLARGYTGRDAIIKFEGCYHGHSDSLLVKAGSGLLTQGV 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEPK (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas putida (strain KT2440) GN=hemL PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.554e-47 Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 + SE F A++ +PGGVNSPVRAFKSVGG P+ F +G+++ D D Y+DYVGSWGP I+GH VL ++ ++ G S+GAP +E +A++V S VPS+EMVR V+SGTEA M +RLAR +TGR+ I +FEGCYHGH+D LVKAGSG+ T G+ Sbjct: 1 MSRSEALFAQAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVVDEDDKRYVDYVGSWGPMILGHGHPDVLDSVRRQLEHGLSYGAPTAMETEMADLVCSIVPSMEMVRMVSSGTEATMSAIRLARGYTGRDAIIKFEGCYHGHSDSLLVKAGSGLLTQGV 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DESVM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=hemL PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.554e-47 Identity = 90/159 (56.60%), Postives = 112/159 (70.44%), Query Frame = 2 Query: 221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 S+E F A++L+PGGVNSPVRA V P+ KGSH+ +DG ++DYV SWGP ++GHA V +A+ + +GTS+GAPC E VLAE VI A+P +EMVR VNSGTEA M LRLAR TGR ++ +F GCYHGHAD FL AGSGVATL + Sbjct: 5 SKELFERAQQLIPGGVNSPVRACLGVDSDPLFVAHAKGSHLTTVDGTSFVDYVQSWGPMLLGHAHPVVASAIHAAVDRGTSYGAPCEDEVVLAEAVIDALPGVEMVRMVNSGTEATMSALRLARGVTGRNKVVKFVGCYHGHADAFLASAGSGVATLSI 163
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_COLP3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=hemL PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.554e-47 Identity = 89/162 (54.94%), Postives = 114/162 (70.37%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 + SE+ F A++++PGGVNSPVRAF VGG P +G++++D D YIDYVGSWGP I+GH +L A+ T K G SFGAP +E +AE V VPS+E +R V+SGTEA M +RLAR +TGR++I +FEGCYHGHAD LVKAGSG TLG+ Sbjct: 1 MNKSEQLFEQAQKIIPGGVNSPVRAFNGVGGTPCFIKRAQGAYIYDADDKAYIDYVGSWGPMILGHNHPAILEAVITTAKNGLSFGAPTEIEITMAEKVRELVPSMESLRMVSSGTEATMSAIRLARGYTGRDKILKFEGCYHGHADALLVKAGSGALTLGV 162 The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bpback to top |