FC876179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DELAS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=hemL PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.110e-46 Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = 2 Query: 233 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 F AK ++PGGVNSPVRAF +VGG P +G+H WD + ++ DY+GSWGP I+GH +V+AA+ +G SFGAP E VLAE ++S +PS++MVR V+SGTEA M LRLAR FTGR +I +F GCYHGHAD LVKAGSG+AT G Sbjct: 16 FERAKAVIPGGVNSPVRAFNAVGGTPRFVRRAQGAHFWDENAQQFTDYIGSWGPMILGHGHPEVMAAVQAAALEGFSFGAPTEREVVLAEKILSLMPSMDMVRMVSSGTEAGMSALRLARGFTGRNKIIKFNGCYHGHADALLVKAGSGLATFG 169
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SHEAM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=hemL PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.756e-46 Identity = 89/161 (55.28%), Postives = 112/161 (69.57%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + SE F AK+ +PGGVNSPVRAF VGG P + G++++D DG YIDYVGSWGP I+GH + A+ + + G SFGAP LE ++AE VI VPS++ VR V+SGTEA M +RLAR +T R++I +FEGCYHGHAD LVKAGSG TLG Sbjct: 1 MTRSETLFEQAKKTIPGGVNSPVRAFNGVGGTPRFIEKADGAYIYDADGKAYIDYVGSWGPMILGHNHPSIREAVLKAVHNGLSFGAPTELEVIMAEKVIEMVPSMDQVRMVSSGTEATMSAIRLARGYTKRDKILKFEGCYHGHADCLLVKAGSGALTLG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PHOLL (Glutamate-1-semialdehyde 2,1-aminomutase OS=Photorhabdus luminescens subsp. laumondii GN=hemL PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.756e-46 Identity = 85/161 (52.80%), Postives = 115/161 (71.43%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + S+ ++ AK+L+PGGVNSPVRAF VGG P+ G++++D+DG YIDYVGSWGP ++GH + A+ + ++G SFGAP E +A++V VPS++MVR VNSGTEA M +RLAR +T R++I +FEGCYHGHAD LVKAGSG T+G Sbjct: 1 MSQSDILYSQAKQLIPGGVNSPVRAFNGVGGTPLFIKHADGAYLYDVDGKAYIDYVGSWGPMVLGHNHSAIRNAVIKAAEQGLSFGAPTAAEVEMAQLVTELVPSMDMVRMVNSGTEATMSAIRLARGYTHRDKIIKFEGCYHGHADCLLVKAGSGALTIG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_METCA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Methylococcus capsulatus GN=hemL PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.756e-46 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 2 Query: 218 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 +S F A +PGGVNSPVRAF+ VGG P+ D +G +++ +DG YIDYVGSWGP I+GHA +VL A+ + +G S+GAP + E +A+ V + +PS++ VR V+SGTEA M +RLAR +TGR++I +FEGCYHGH+D LVKAGSG TLG Sbjct: 3 DSTTLFADACRFIPGGVNSPVRAFRGVGGTPVFVDRAEGPYVYGVDGKAYIDYVGSWGPMILGHAHPEVLTAVHAAVDRGLSYGAPTVAETAMAKTVCALMPSLDRVRMVSSGTEATMSAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGALTLG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_CYTH3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=hemL PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.756e-46 Identity = 83/161 (51.55%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 215 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 K S F+ AKE++PGGVNSPVRAF++VGG P+ G+++ D D N+YI+ + SWGP I+GH ++ + A+ + + SFGAP E +AE+++S VPS+EMVR VNSGTEA M +R+AR +TG+E+I +FEGCYHGH D FL+ AGSG T+G+ Sbjct: 4 KTSAGLFSRAKEVIPGGVNSPVRAFRAVGGNPLFIKRAHGAYLVDEDDNQYIELINSWGPMILGHGNELIEKAVRDALSNSLSFGAPSRKEVEMAELIVSMVPSVEMVRMVNSGTEATMSAIRVARGYTGKEKIIKFEGCYHGHGDSFLIAAGSGAVTMGV 164
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_NEIMA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Neisseria meningitidis serogroup A GN=hemL PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.600e-46 Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + +E F+ AK ++PGGVNSPVRAF SVGG P +G+++WD +G Y DYVGSWGPAI+GHA +V+ A+ E G SFGAP E +AE + +PS+E +R V+SGTEA M +RLAR FTGR++I +FEGCYHGH+D LVKAGSG+ T G Sbjct: 1 MNRNEILFDRAKAVIPGGVNSPVRAFGSVGGVPRFIKKAEGAYVWDENGTRYTDYVGSWGPAIVGHAHPEVIEAVREAALGGLSFGAPTEGEIAIAEEIAKIMPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTFG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ERWT9 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=hemL PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.600e-46 Identity = 86/161 (53.42%), Postives = 114/161 (70.81%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + SE + A++L+PGGVNSPVRAF VGG P+ + G++++D DG YIDYVGSWGP ++GH + A+ + ++G SFGAP +E +A +V VP+++MVR VNSGTEA M +RLAR FT R++I +FEGCYHGHAD LVKAGSG TLG Sbjct: 1 MSKSENLYAQAQQLIPGGVNSPVRAFNGVGGVPLFIERANGAYLYDADGKAYIDYVGSWGPMVLGHNHPAIRNAVIDAAERGLSFGAPTEMEVKMAALVTELVPTMDMVRMVNSGTEATMSAIRLARGFTHRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_NEIMB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Neisseria meningitidis serogroup B GN=hemL PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46 Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + +E F+ AK ++PGGVNSPVRAF SVGG P +G+++WD +G Y DYVGSWGPAI+GHA +V+ + E G SFGAP E V+AE + +PS+E +R V+SGTEA M +RLAR FTGR++I +FEGCYHGH+D LVKAGSG+ T G Sbjct: 1 MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYVWDENGTRYTDYVGSWGPAIVGHAHPEVVETVCEAALGGLSFGAPTEGEIVIAEEIAKIMPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTFG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_METPP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Methylibium petroleiphilum (strain PM1) GN=hemL PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46 Identity = 89/154 (57.79%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 233 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 F A+ +PGGVNSPVRAF++VGG P G+++WD DG YIDY+GSWGP I+GH VL A+ + +G SFGAP E LAE ++ VPS E VR V+SGTEA M LRLAR TGR +I +FEGCYHGHAD LVKAGSG+AT G Sbjct: 10 FERARRSIPGGVNSPVRAFRAVGGTPRFIARADGAYLWDADGKRYIDYIGSWGPMILGHGHPAVLEAVQKAATEGFSFGAPTEREVELAEEILKLVPSAEQVRLVSSGTEAAMSALRLARGATGRSKIVKFEGCYHGHADALLVKAGSGLATFG 163
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_HELP2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Helicobacter pylori (strain P12) GN=hemL PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46 Identity = 89/161 (55.28%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 L +S FN AK+++ GGVNSPVRAFKSV G P KG++++D+D N YID+V SWGP I GHAD+++ + T+KKGTSFGAP LE LA+ +IS ++ VR VNSGTEA M +RLARA++ ++ + +FEGCYHGH+D LVKAGSG AT G Sbjct: 3 LLHSINDFNEAKQVIAGGVNSPVRAFKSVKGTPPFILKGKGAYLYDVDNNHYIDFVQSWGPLIFGHADEEIEENIINTLKKGTSFGAPTELETTLAKEIISCYEGLDKVRLVNSGTEATMSAIRLARAYSQKDDLIKFEGCYHGHSDSLLVKAGSGCATFG 163 The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bpback to top |