FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10304 contig Ccv1_Contig10304:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_COXB2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiella burnetii (strain CbuG_Q212) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 91/160 (56.88%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  218 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +S   FN A+  MPGGVNSPVRAF +VGG P       G ++ D+D  +YIDYVGSWGP I+GHA   V+ A  E ++ G SFGAPC  E  LA ++   +PSIE VR VNSGTEA M  LRLAR  TGR +I +FEGCYHGHAD  LV AGSG  T G+
Sbjct:    4 HSAALFNKAQNYMPGGVNSPVRAFGAVGGVPRFIKKASGPYLIDVDEKKYIDYVGSWGPMILGHAHPAVIQAAQEAVQNGLSFGAPCENEIKLAALIGEFMPSIEKVRMVNSGTEATMSALRLARGVTGRSKIIKFEGCYHGHADCLLVNAGSGALTFGM 163          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_COXB1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiella burnetii (strain CbuK_Q154) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 91/160 (56.88%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  218 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +S   FN A+  MPGGVNSPVRAF +VGG P       G ++ D+D  +YIDYVGSWGP I+GHA   V+ A  E ++ G SFGAPC  E  LA ++   +PSIE VR VNSGTEA M  LRLAR  TGR +I +FEGCYHGHAD  LV AGSG  T G+
Sbjct:    4 HSAALFNKAQNYMPGGVNSPVRAFGAVGGVPRFIKKASGPYLIDVDEKKYIDYVGSWGPMILGHAHPAVIQAAQEAVQNGLSFGAPCENEIKLAALIGEFMPSIEKVRMVNSGTEATMSALRLARGVTGRSKIIKFEGCYHGHADCLLVNAGSGALTFGM 163          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ARCB4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Arcobacter butzleri (strain RM4018) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 87/158 (55.06%), Postives = 113/158 (71.52%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            S EA+  A E++PGGV+SPVRAFKSVGG P      KG++++D+DGN+Y+D+V SWGP I GH D  +   + +T KKG SFGAP  LE  LA  ++    +I+ VRFV+SGTEA M  +RLAR  TG+  I +FEGCYHGH+D  LV+AGSG+AT G
Sbjct:    5 SIEAYTKACEVIPGGVDSPVRAFKSVGGTPPFIKKGKGAYLYDVDGNKYVDFVQSWGPLIFGHCDKDIEKVVIKTAKKGLSFGAPTKLETKLASEIVEMYDNIDKVRFVSSGTEATMSAIRLARGVTGKNDIVKFEGCYHGHSDSLLVQAGSGLATFG 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_RALSO (Glutamate-1-semialdehyde 2,1-aminomutase OS=Ralstonia solanacearum GN=hemL PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45
Identity = 90/156 (57.69%), Postives = 107/156 (68.59%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVAT 688
            S   F  A++ +PGGVNSPVRAF+SVGG P       G ++WD DG   IDYVGSWGP I+GHA  +V+ A+ +      SFGAP   E V+AE +   VPSIE VR V+SGTEA M  LRLAR FTGR+ I +FEGCYHGHAD  LVKAGSG+ T
Sbjct:    7 SVSLFERAQKTIPGGVNSPVRAFRSVGGTPRFIAKAAGPYLWDADGTRLIDYVGSWGPMIVGHAHPEVVRAVQQVAADSFSFGAPTEAEVVMAETLCELVPSIEQVRLVSSGTEATMSALRLARGFTGRDLIVKFEGCYHGHADSLLVKAGSGLLT 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_HELPJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Helicobacter pylori J99 GN=hemL PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45
Identity = 88/161 (54.66%), Postives = 115/161 (71.43%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            L +S   FN AK+++ GGVNSPVRAFKSV G P      KG++++D+D N YID+V SWGP I GHAD+++   +   +KKGTSFGAP  LE  LA+ +IS    ++ VR VNSGTEA M  +RLARA++ ++ + +FEGCYHGH+D  LVKAGSG AT G
Sbjct:    3 LLHSINDFNEAKQVIAGGVNSPVRAFKSVKGTPPFILKGKGAYLYDVDNNHYIDFVQSWGPLIFGHADEEIEENIINVLKKGTSFGAPTELETTLAKEIISCYEGLDKVRLVNSGTEATMSAIRLARAYSQKDDLIKFEGCYHGHSDSLLVKAGSGCATFG 163          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DESVV (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45
Identity = 86/161 (53.42%), Postives = 112/161 (69.57%), Query Frame = 2
Query:  215 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            + S E F  A++L+PGGVNSPVRA   V  +P+      GS +  +DG  +ID+V SWGP ++GH   +V AA+   + +GTS+GAPC  E VLA  V+ A+P ++MVR VNSGTEA M  LRLAR +TGR ++ +F GCYHGHADPFL  AGSGVATL +
Sbjct:    3 QRSSELFERAQQLIPGGVNSPVRACLGVDSEPLFIARAAGSRLHTVDGETFIDFVESWGPMLLGHTHPEVTAAVHAAVDRGTSYGAPCEDEVVLAAKVVDALPGVDMVRMVNSGTEATMSALRLARGYTGRTKLVKFVGCYHGHADPFLASAGSGVATLSI 163          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DESVH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45
Identity = 86/161 (53.42%), Postives = 112/161 (69.57%), Query Frame = 2
Query:  215 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            + S E F  A++L+PGGVNSPVRA   V  +P+      GS +  +DG  +ID+V SWGP ++GH   +V AA+   + +GTS+GAPC  E VLA  V+ A+P ++MVR VNSGTEA M  LRLAR +TGR ++ +F GCYHGHADPFL  AGSGVATL +
Sbjct:    3 QRSSELFERAQQLIPGGVNSPVRACLGVDSEPLFIARAAGSRLHTVDGETFIDFVESWGPMLLGHTHPEVTAAVHAAVDRGTSYGAPCEDEVVLAAKVVDALPGVDMVRMVNSGTEATMSALRLARGYTGRTKLVKFVGCYHGHADPFLASAGSGVATLSI 163          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ALISL (Glutamate-1-semialdehyde 2,1-aminomutase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45
Identity = 90/161 (55.90%), Postives = 110/161 (68.32%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  S E F  A+E +PGGVNSPVRAF  VGG PI  +   G  ++D DG  YIDYVGSWGP I+GH    +  A+    ++G SFGAP   E  +AE+V   VPS+E VR V+SGTEA M  +RLAR +TGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTKSAELFAKAQEKIPGGVNSPVRAFAGVGGSPIFIERADGPLIFDADGKAYIDYVGSWGPMILGHNHAAIREAVISAAQRGLSFGAPTETEINMAELVSELVPSMEQVRMVSSGTEATMSAIRLARGYTGRDKIMKFEGCYHGHADSLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_VIBFM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio fischeri (strain MJ11) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45
Identity = 89/161 (55.28%), Postives = 110/161 (68.32%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  S E F  A++ +PGGVNSPVRAF  VGG PI  +   G  ++D DG  YIDYVGSWGP I+GH    +  A+    ++G SFGAP   E  +AE+V   VPS+E VR V+SGTEA M  +RLAR +TGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTKSAELFAKAQDKIPGGVNSPVRAFAGVGGSPIFVERADGPLIFDADGKAYIDYVGSWGPMILGHNHAAIREAVISAAQRGLSFGAPTETEITMAELVSELVPSMEQVRMVSSGTEATMSAIRLARGYTGRDKIMKFEGCYHGHADSLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_VIBF1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45
Identity = 89/161 (55.28%), Postives = 110/161 (68.32%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  S E F  A++ +PGGVNSPVRAF  VGG PI  +   G  ++D DG  YIDYVGSWGP I+GH    +  A+    ++G SFGAP   E  +AE+V   VPS+E VR V+SGTEA M  +RLAR +TGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTKSAELFAKAQDKIPGGVNSPVRAFAGVGGSPIFVERADGPLIFDADGKAYIDYVGSWGPMILGHNHAAIREAVISAAQRGLSFGAPTETEITMAELVSELVPSMEQVRMVSSGTEATMSAIRLARGYTGRDKIMKFEGCYHGHADSLLVKAGSGALTLG 161          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_COXB21.368e-4556.88Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiel... [more]
GSA_COXB11.368e-4556.88Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiel... [more]
GSA_ARCB41.368e-4555.06Glutamate-1-semialdehyde 2,1-aminomutase OS=Arcoba... [more]
GSA_RALSO1.787e-4557.69Glutamate-1-semialdehyde 2,1-aminomutase OS=Ralsto... [more]
GSA_HELPJ1.787e-4554.66Glutamate-1-semialdehyde 2,1-aminomutase OS=Helico... [more]
GSA_DESVV1.787e-4553.42Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA_DESVH1.787e-4553.42Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA_ALISL1.787e-4555.90Glutamate-1-semialdehyde 2,1-aminomutase OS=Aliivi... [more]
GSA_VIBFM2.333e-4555.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio... [more]
GSA_VIBF12.333e-4555.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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