FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_HAMD5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45
Identity = 83/161 (51.55%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            + +S + +++A+  +PGGVNSPVRAF+ V G+P   +   G++++D+DG  YIDYVGSWGP I+GH    +  AL + ++ G SFGAP  +E  +A+++   +PS++MVR VNSGTEA M  +RLAR FT R++I +FEGCYHGH+D  LVKAGSG  TLG
Sbjct:    1 MNDSNKLYDLAQCFIPGGVNSPVRAFQGVDGKPFFVEKAGGAYLYDVDGRAYIDYVGSWGPMILGHRHPVICDALTKAIENGISFGAPTEIEVKMAQLLTQLMPSMDMVRMVNSGTEATMSAIRLARGFTKRDKIIKFEGCYHGHSDCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIAC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=hemL PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 2
Query:  233 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            F  AK L+PGGVNSPVRAF++VGG P      +G++ WD +G  +IDY+GSWGP I+GH    VL A+ +    G SFGAP   E  LAE ++  VPS+EM+R V+SGTEA M  +RLAR  TGR RI +F GCYHGHAD  LVKAGSG+AT G
Sbjct:   12 FERAKALIPGGVNSPVRAFRAVGGTPRFVQRAQGAYFWDANGQRFIDYIGSWGPMILGHGHPAVLEAVQKAALDGFSFGAPTEREVELAEEILRHVPSMEMIRLVSSGTEAGMSAIRLARGATGRSRIIKFNGCYHGHADALLVKAGSGLATFG 165          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SYNFM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 87/163 (53.37%), Postives = 110/163 (67.48%), Query Frame = 2
Query:  209 TLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            T   S   +  A   +PGGVNSPVR+ ++VG  PI     KG ++WD DGN Y+D+V SWGP I+GHA   V+ A+   ++KGTS+G P  +E  +A  V+  VPSIEMVR VNSGTEA M  +RLAR +TGR  I +F GCYHGH D  LVKAGSG+AT G+
Sbjct:    2 TRDRSNLLYEDAGRFIPGGVNSPVRSGRAVGTNPIFIREAKGCYLWDEDGNRYVDFVASWGPLIVGHAHPAVVEAVRAAVEKGTSYGIPTEIEVRMARKVVEMVPSIEMVRMVNSGTEATMSAIRLARGYTGRPGIIKFNGCYHGHGDCLLVKAGSGLATFGI 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_CORJK (Glutamate-1-semialdehyde 2,1-aminomutase OS=Corynebacterium jeikeium (strain K411) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 96/176 (54.55%), Postives = 118/176 (67.05%), Query Frame = 2
Query:  173 MSVSVEEQ-KKNFTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            MSV+ + Q   N + + SE+AF+ A+ L+PGGVNSPVRAF SVGG P    S +GS + D+DGN Y+D   SWGP I GHA  Q++ A+ E    G SFGAP  +E  L E  I    S+E  R VNSGTEA M  +RLAR +TGR++I +FEGCYHGH D  LV AGSGVAT GL
Sbjct:    1 MSVNADSQHSNNSSHQASEKAFDRARSLIPGGVNSPVRAFGSVGGTPPFITSAQGSTLHDVDGNSYVDLFCSWGPMIHGHAHPQIVEAVREAAGHGLSFGAPTTMEVDLVE-EIDRRTSVEKARLVNSGTEATMSAIRLARGYTGRDKILKFEGCYHGHVDSLLVAAGSGVATFGL 175          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DIAST (Glutamate-1-semialdehyde 2,1-aminomutase OS=Diaphorobacter sp. (strain TPSY) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45
Identity = 88/154 (57.14%), Postives = 109/154 (70.78%), Query Frame = 2
Query:  233 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            F  AK L+PGGVNSPVRAF++VGG P      +G++MWD +G  +IDY+GSWGP I+GH    VL A+ +   +G SFGAP   E  LAE +I  VPS+EM+R V+SGTEA M  +RLAR  T R +I +F GCYHGHAD  LVKAGSG+AT G
Sbjct:   12 FERAKALIPGGVNSPVRAFRAVGGTPRFITRAQGAYMWDANGQRFIDYIGSWGPMILGHGHPAVLEAVQKAALEGFSFGAPTEREVELAEEIIRHVPSMEMIRLVSSGTEAGMSAIRLARGATRRNKIIKFNGCYHGHADSLLVKAGSGLATFG 165          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_CAMC5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Campylobacter curvus (strain 525.92) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45
Identity = 80/158 (50.63%), Postives = 118/158 (74.68%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            ++EAF+ AK+ + GGVNSPVRAF SVGG+PI+ D  KG++++DI+G +Y+D++ SWGP I GH D  +  A+ E +KKG SFGAP L+E  LA+++     +++ +RFV+SGTEA M  +R+AR ++ ++ + +FEGCYHGH+D  L+KAGSG  T G
Sbjct:    3 NKEAFSEAKKFIAGGVNSPVRAFGSVGGEPIIIDHGKGAYIYDIEGKKYLDFIQSWGPLIFGHCDADIEKAVIEAVKKGLSFGAPTLVETTLAKILCEKFENLDKIRFVSSGTEATMSAIRVARGYSKKDGLIKFEGCYHGHSDALLIKAGSGATTYG 160          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACISJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidovorax sp. (strain JS42) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45
Identity = 88/154 (57.14%), Postives = 109/154 (70.78%), Query Frame = 2
Query:  233 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            F  AK L+PGGVNSPVRAF++VGG P      +G++MWD +G  +IDY+GSWGP I+GH    VL A+ +   +G SFGAP   E  LAE +I  VPS+EM+R V+SGTEA M  +RLAR  T R +I +F GCYHGHAD  LVKAGSG+AT G
Sbjct:   12 FERAKALIPGGVNSPVRAFRAVGGTPRFITRAQGAYMWDANGQRFIDYIGSWGPMILGHGHPAVLEAVQKAALEGFSFGAPTEREVELAEEIIRHVPSMEMIRLVSSGTEAGMSAIRLARGATRRNKIIKFNGCYHGHADSLLVKAGSGLATFG 165          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SALRD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Salinibacter ruber (strain DSM 13855) GN=hemL PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 87/170 (51.18%), Postives = 114/170 (67.06%), Query Frame = 2
Query:  185 VEEQKKNFTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +E    +  L+ S   +  A+  +PGGVNSP RAF SVGG P+  +  +G+++ D D NEY+DYVGSWGP I GHA   V+ A+ +  +  TSFGAP  +E  +A++V   VPS+E VR VNSGTEA M   RLAR +TGR++I +FEG YHGH D FL+ AGSG  TLG
Sbjct:    1 MEVAPSDVDLRTSRRFYERAQHSIPGGVNSPARAFDSVGGTPLFIERAEGAYLEDADANEYLDYVGSWGPMIFGHAHPDVVEAVKDQAEASTSFGAPTEIEIEVADLVCDLVPSVEKVRMVNSGTEATMSAARLARGYTGRDKIIKFEGNYHGHGDFFLISAGSGAMTLG 170          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_LAWIP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 83/161 (51.55%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  215 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            ++S+E ++ A +L+PGGVNSPVRA ++VG +P+  +S KG+++  +DG E +D+V SWG  I+GH +  V  A+ +    GT+FGAPC  E +LA+ +I A P ++M+R V+SGTEA M  LRLAR  TGR ++ +F GCYHGHADPFL  AGSGVATL +
Sbjct:    4 ESSKELYSKAVKLIPGGVNSPVRACRNVGCEPVFIESAKGAYLTTVDGQELLDFVLSWGAIILGHTNSTVTNAIKKAASNGTTFGAPCKAEVLLAKEIIDAFPGMDMIRMVSSGTEATMSALRLARGVTGRNKVLKFIGCYHGHADPFLASAGSGVATLSI 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_HELAH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Helicobacter acinonychis (strain Sheeba) GN=hemL PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 87/161 (54.04%), Postives = 115/161 (71.43%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            L +S   FN AK+++ GGVNSPVRAFKSV G P      KG++++D+D N YID+V SWGP I GHAD+++   + + +KKGTSFGAP  LE  LA+ +IS    ++ VR VNSGTEA M  +RLARA++ ++ + +FEGCYHGH+D  LVKAGSG  T G
Sbjct:    3 LLHSINDFNEAKQVIVGGVNSPVRAFKSVKGTPPFILKGKGAYLYDVDNNHYIDFVQSWGPLIFGHADEEIEENIIKALKKGTSFGAPTELETTLAKEIISCYDGLDKVRLVNSGTEATMSAIRLARAYSQKDDLIKFEGCYHGHSDSLLVKAGSGCTTFG 163          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_HAMD52.333e-4551.55Glutamate-1-semialdehyde 2,1-aminomutase OS=Hamilt... [more]
GSA_ACIAC2.333e-4557.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidov... [more]
GSA_SYNFM3.047e-4553.37Glutamate-1-semialdehyde 2,1-aminomutase OS=Syntro... [more]
GSA_CORJK3.047e-4554.55Glutamate-1-semialdehyde 2,1-aminomutase OS=Coryne... [more]
GSA_DIAST3.980e-4557.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Diapho... [more]
GSA_CAMC53.980e-4550.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Campyl... [more]
GSA_ACISJ3.980e-4557.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidov... [more]
GSA_SALRD5.198e-4551.18Glutamate-1-semialdehyde 2,1-aminomutase OS=Salini... [more]
GSA_LAWIP5.198e-4551.55Glutamate-1-semialdehyde 2,1-aminomutase OS=Lawson... [more]
GSA_HELAH5.198e-4554.04Glutamate-1-semialdehyde 2,1-aminomutase OS=Helico... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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