FC876179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_BORPD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=hemL PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45 Identity = 88/161 (54.66%), Postives = 112/161 (69.57%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + ++ + F+ A +PGGVNSPVRAF+SVGG P +G ++WD + YIDYVGSWGPAI+GHA V+ A+ E G SFGAP E LAE++I +PS+E VR V+SGTEA M +RLAR TGR +I +FEGCYHGH+D LVKAGSG+ T G Sbjct: 1 MSSNAQLFDRACRSIPGGVNSPVRAFRSVGGTPRFIKRAQGPYVWDEEDTRYIDYVGSWGPAILGHAHPDVVQAVREAALDGLSFGAPTRAEVELAEVLIERLPSLEQVRLVSSGTEATMTAIRLARGATGRAKIIKFEGCYHGHSDSLLVKAGSGLLTFG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_VEREI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Verminephrobacter eiseniae (strain EF01-2) GN=hemL PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45 Identity = 85/154 (55.19%), Postives = 109/154 (70.78%), Query Frame = 2 Query: 233 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 F AK L+PGGVNSPVRAFK+VGG P +G++ WD + +IDY+GSWGP I+GH VL A+ + +G SFGAP E LAE ++ +PS++M+R V+SGTEA M +RLAR TGR ++ +FEGCYHGHAD LVKAGSG+AT G Sbjct: 12 FERAKALIPGGVNSPVRAFKAVGGTPRFVKRARGAYFWDANDQRFIDYIGSWGPMILGHGHPAVLEAVQQAALEGLSFGAPTERELELAEAILRLLPSMQMIRLVSSGTEAGMSAIRLARGATGRSKLIKFEGCYHGHADALLVKAGSGLATFG 165
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_MYCGI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Mycobacterium gilvum (strain PYR-GCK) GN=hemL PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45 Identity = 90/163 (55.21%), Postives = 108/163 (66.26%), Query Frame = 2 Query: 209 TLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 T + S + F A ++PGGVNSPVRAF SVGG P S KG + D+DGN+Y+D V SWGP I+GHA V+ A+ G SFGAP E+ LA +I V +E VR VNSGTEA M +RLAR FTGR +I +F GCYHGH+D L AGSGVATLGL Sbjct: 3 TTEESAKLFADASSVIPGGVNSPVRAFNSVGGTPRFITSAKGCRLTDVDGNQYVDLVCSWGPMILGHAHPAVVEAVQRVAAHGLSFGAPTPSESELAREIIDRVAPVERVRLVNSGTEATMSAIRLARGFTGRAKIVKFSGCYHGHSDALLADAGSGVATLGL 165
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_LARHH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Laribacter hongkongensis (strain HLHK9) GN=hemL PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45 Identity = 86/161 (53.42%), Postives = 109/161 (67.70%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + +++ F AK ++PGGVNSPVRAF SVGG P +G++MWD D IDY+GSWGP I+GHA V+ A+ + G SFG P E +AE + +PSIE VR V+SGTEA M +RLAR FTGR+ I +FEGCYHGH+D LVKAGSG+ T G Sbjct: 1 MDRNQQLFERAKHVIPGGVNSPVRAFGSVGGSPRFIKRAQGAYMWDADDRRLIDYIGSWGPMILGHAHPAVVEAVQQAAVHGLSFGTPTEAEIGIAEEICKLMPSIERVRLVSSGTEATMSAIRLARGFTGRDAIIKFEGCYHGHSDSLLVKAGSGLLTFG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_HELPY (Glutamate-1-semialdehyde 2,1-aminomutase OS=Helicobacter pylori GN=hemL PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45 Identity = 87/161 (54.04%), Postives = 115/161 (71.43%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 L +S FN AK+++ GGVNSPVRAFKSV G P KG++++D+D N YID+V SWGP I GHAD+++ + +KKGTSFGAP LE LA+ +IS ++ VR V+SGTEA M +RLARA++ ++ + +FEGCYHGH+D LVKAGSG AT G Sbjct: 3 LLHSINDFNEAKQVIAGGVNSPVRAFKSVKGTPPFILKGKGAYLYDVDNNHYIDFVQSWGPLIFGHADEEIEENIINALKKGTSFGAPTELETTLAKEIISCYEGLDKVRLVSSGTEATMSAIRLARAYSQKDDLIKFEGCYHGHSDSLLVKAGSGCATFG 163
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_VIBSL (Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio splendidus (strain LGP32) GN=hemL PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.866e-45 Identity = 88/161 (54.66%), Postives = 110/161 (68.32%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 + S E + A++ +PGGVNSPVRAF VGG PI + G ++D DG YIDYVGSWGP I+GH + A+ ++G SFGAP E +AE+V VPS+E +R V+SGTEA M +RLAR FTGR++I +FEGCYHGHAD LVKAGSG TLG Sbjct: 1 MTKSAELYEKAQQTIPGGVNSPVRAFNGVGGSPIFVERADGPLIFDADGKAYIDYVGSWGPMILGHNHVVIRDAVIAAAQRGLSFGAPTETEIKMAELVSEMVPSMEQLRMVSSGTEATMSAIRLARGFTGRDKILKFEGCYHGHADSLLVKAGSGALTLG 161
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEA6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=hemL PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.866e-45 Identity = 84/162 (51.85%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 ++ SE+ F A++ +PGGVNSPVRAF++VGG P + G +++D DG +YIDYV SWGP ++GH + + A+ + + G SFGAP E +A++V VPS+EM+R VNSGTEA M +RLAR +T R++I +FEGCYHGHAD LVKAGSG T G+ Sbjct: 1 MQKSEQLFARAQKHIPGGVNSPVRAFRAVGGTPPFIEKADGPYLYDADGKQYIDYVQSWGPMVLGHNNPIIRQAVIDAAQNGLSFGAPTEAEVTIADLVSELVPSMEMLRMVNSGTEATMSAIRLARGYTKRDKILKFEGCYHGHADALLVKAGSGALTFGV 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DESAA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=hemL PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.866e-45 Identity = 89/162 (54.94%), Postives = 113/162 (69.75%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 ++ S+E F A + +PGGVNSPVRA SVG P +GS ++D DG +YIDY+GSWGP I+GH V+ A+ + G +FGAP LE LAE V++ +PS+EMVR VNSGTEA M +RLAR TGR+ I +F+GCYHGH D LV AGSGVATLG+ Sbjct: 1 MEKSKELFARACKTIPGGVNSPVRACGSVGTDPCFIARGQGSAIFDADGKQYIDYIGSWGPLILGHRHPAVIKAIEAALANGCTFGAPTELEIDLAEAVVNIMPSVEMVRMVNSGTEATMSAIRLARGATGRDGIVKFDGCYHGHGDSLLVAAGSGVATLGI 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIC1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=hemL PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.866e-45 Identity = 88/159 (55.35%), Postives = 110/159 (69.18%), Query Frame = 2 Query: 221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 S F A+ +PGGVNSPVRAF++VGG P S G ++ D+DGN Y+D V SWGP I+GHA V+AA+ + ++GTSFGAP E +AE + VP++EM+R VNSGTEA M LRLARA+T R + +F GCYHGH D L AGSGVATLGL Sbjct: 10 SAACFERARARIPGGVNSPVRAFRAVGGTPRFIQSGAGPYLVDVDGNRYVDLVCSWGPLILGHAHPAVVAAVKQAAERGTSFGAPTEAEIEMAEEIARRVPAVEMIRLVNSGTEATMSALRLARAYTNRPLVVKFAGCYHGHVDALLSAAGSGVATLGL 168
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ARTCA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=hemL PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.158e-44 Identity = 91/159 (57.23%), Postives = 112/159 (70.44%), Query Frame = 2 Query: 221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 +EE F+ A++LMPGGVNSPVRAF SVGG P S KG ++ D DGNEY+D V SWGPA++GHA VL A+ + +G SFGA E LAE+V+ VP++E +R V++GTEA M +RLAR FTGR I +F GCYHGH D L AGSGVATL L Sbjct: 8 NEELFDRARQLMPGGVNSPVRAFGSVGGTPRFMVSAKGPYLMDADGNEYVDLVCSWGPALLGHAHPAVLDAVHAAVDRGLSFGASTPDEANLAEIVMERVPAVERLRMVSTGTEATMTAVRLARGFTGRNLIIKFAGCYHGHLDGLLAAAGSGVATLAL 166 The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bpback to top |