FC876179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_FRASN (Glutamate-1-semialdehyde 2,1-aminomutase OS=Frankia sp. (strain EAN1pec) GN=hemL PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.725e-43 Identity = 87/163 (53.37%), Postives = 106/163 (65.03%), Query Frame = 2 Query: 209 TLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 T S++ F A+ ++PGGVNSPVRAF++VGG P S G + D DG Y+D V SWGP I+GHA V+ A+ +GTSFG P E LAE+++ V +E VR VNSGTEA M +RLAR FTGR I +F GCYHGH D L AGSGVATLGL Sbjct: 6 TAPASDDLFRRAQRVVPGGVNSPVRAFRAVGGTPRFMTSGSGPRLVDADGRTYVDLVCSWGPMILGHAHPDVVQAITAAAARGTSFGTPTPGEVELAELIVERVAPVEQVRLVNSGTEATMSAIRLARGFTGRPTIVKFAGCYHGHVDALLASAGSGVATLGL 168
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DECAR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Dechloromonas aromatica (strain RCB) GN=hemL PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.725e-43 Identity = 85/158 (53.80%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 +++ F A+ +PGGVNSPVRAF+SVGG P F G+ + D DG Y DYVGSWGP I+GHA V+AA+ + G SFGAP E +A+++ VPS++MVR V+SGTEA M +RLAR TGR+ + +FEGCYHGH+D LVKAGSG+ T G Sbjct: 5 NQQLFERAQRHIPGGVNSPVRAFRSVGGTPCFFQKGVGAKVQDADGKWYTDYVGSWGPMILGHAHPDVIAAVQAAVVDGLSFGAPTEKEVDIADLLCELVPSMDMVRLVSSGTEATMSAIRLARGHTGRDVLIKFEGCYHGHSDGLLVKAGSGLLTFG 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ALHEH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=hemL PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.725e-43 Identity = 85/162 (52.47%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 ++ S E F A++ + GGVNSPVRAF VGG+P +G +++D DGN Y+DYV SWGP + GHA +V+ A+ G SFGAP +E +AE + + +PS+E VR VNSGTEA M LRLAR TGRE+I +F GCYHGH D LV+AGSG TLG+ Sbjct: 1 MQRSHELFERARQHIVGGVNSPVRAFTGVGGEPPFIARAEGPYLYDEDGNRYVDYVCSWGPMVAGHAHPKVVRAVQAAAADGLSFGAPTEVEIRMAEKLKAMLPSLERVRMVNSGTEATMSALRLARGHTGREKIIKFRGCYHGHVDALLVQAGSGALTLGI 162
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_NOCFA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Nocardia farcinica GN=hemL PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.354e-43 Identity = 88/159 (55.35%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 S F+ A +++PGGVNSPVRAF+SVGG P S G + D DGNEY+D V SWGP I+GHA V+ A+ G SFGAP E LAE +++ V ++ VR VNSGTEA M +RLAR FTGR +I +F GCYHGH D L AGSGVATLGL Sbjct: 15 SARLFDRAAQVIPGGVNSPVRAFRSVGGTPRFIASADGYTLTDADGNEYVDLVCSWGPMILGHAHPAVVDAVRRAATGGLSFGAPTEAEVELAEHIVARVAPVDRVRLVNSGTEATMSAVRLARGFTGRTKIIKFAGCYHGHVDALLADAGSGVATLGL 173
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_THERP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=hemL PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43 Identity = 82/162 (50.62%), Postives = 113/162 (69.75%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 ++NS ++ A++ PGGVNSPVRAF++VG +P+V +G+++ D DG ++DY+ SWG + GHA V+ L E +++GTSFG E LA ++++VP+IE+VRFVNSGTEA M +RLARA TGR + +F GCYHGH D LV AGSGV T GL Sbjct: 3 MENSGSLWDAARQFFPGGVNSPVRAFRAVGEEPVVAVRGEGAYLIDADGRRFLDYICSWGALLAGHAHPHVVDRLSEAIQRGTSFGLLSPYEVELARAIVASVPAIELVRFVNSGTEATMSAIRLARAVTGRNLVVKFAGCYHGHVDGLLVAAGSGVLTFGL 164
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_CAMLR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=hemL PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43 Identity = 81/159 (50.94%), Postives = 112/159 (70.44%), Query Frame = 2 Query: 212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVAT 688 +KN+++AF A E + GGV+SPVRAF SVG P+ KG+++ DI+ N YIDYV SWGP + GH D+ V A + ++ G+SFGAP L E LA+ ++ P ++ +RFV+SGTEA M +RLAR F+ +++I +FEGCYHGH+D LV AGSG AT Sbjct: 1 MKNNKKAFEEACEYIAGGVDSPVRAFASVGSNPLFIKKGKGAYISDIEDNTYIDYVQSWGPLLFGHCDEDVEKACKKALEHGSSFGAPTLAETKLAKFILQDWPHLDKIRFVSSGTEATMSAIRLARGFSKKDKIIKFEGCYHGHSDSLLVSAGSGAAT 159
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_RHOE4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=hemL PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.084e-42 Identity = 87/160 (54.37%), Postives = 103/160 (64.38%), Query Frame = 2 Query: 218 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 NS F A ++PGGVNSPVRAF SVGG P G + D+DGN Y+D V SWGP I+GHA V+ A+ E G SFGAP E LAE +++ V +E VR VNSGTEA M +RLAR FTGR +I +F GCYHGH D L AGSG+AT GL Sbjct: 5 NSARLFERAGNVIPGGVNSPVRAFGSVGGTPRFIREASGYTLTDVDGNNYVDLVSSWGPMILGHAHPAVVEAVREAALGGLSFGAPTEGEVALAEEIVARVAPVEKVRLVNSGTEATMSAVRLARGFTGRTKIIKFSGCYHGHVDALLADAGSGLATFGL 164
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_CORU7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=hemL PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42 Identity = 89/159 (55.97%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697 S A A+ +PGGVNSPVRAF SVGG S GS + D DG Y+D V SWGP I GHA +++ A+ T +G SFGAP LE LAE +++ S+E VR VNSGTEA M +RLAR FTGR++I +FEGCYHGH D LV AGSGVAT GL Sbjct: 19 SAAAMERARRFIPGGVNSPVRAFGSVGGTSPFITSASGSQLQDADGLSYVDLVCSWGPMIHGHAHPEIVEAVKSTASRGLSFGAPTSLEVDLAEEIVNRT-SVEKVRLVNSGTEATMSAVRLARGFTGRDKILKFEGCYHGHVDSLLVAAGSGVATFGL 176
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA1_BACSK (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus clausii (strain KSM-K16) GN=hemL1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42 Identity = 82/161 (50.93%), Postives = 113/161 (70.19%), Query Frame = 2 Query: 215 KNSEEAFNVAKELMPGGVNSPVRAFKSVGG-QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 K SE + A+ ++ GGVNSP RA+K VGG P+ + +G++ +D+DGN YIDY+ ++GP I GHA + A+ + KG FG P LEN A+ + +A+PS+E VRFVNSGTEA M +R+ARA+TG+E+I +F GCYHGH+D LV AGSG +TLG Sbjct: 4 KTSESLYQEAQHVIVGGVNSPSRAYKGVGGGTPVFMERGEGAYFYDVDGNRYIDYLAAYGPIITGHAHPVITKAIQDQAAKGVLFGTPTRLENEFAQELTNAIPSLEKVRFVNSGTEAVMTTIRVARAYTGKEKIIKFAGCYHGHSDLVLVAAGSGPSTLG 164
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA1_ANOFW (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=hemL1 PE=3 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42 Identity = 83/165 (50.30%), Postives = 115/165 (69.70%), Query Frame = 2 Query: 203 NFTLKNSEEAFNVAKELMPGGVNSPVRAFKSVGG-QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694 NFT SE+ + A E + GGVNSP R++K+VGG P+V + +G++ WD+DGN+YIDY+ ++GP I GHA + A+ + G +G P E A+M+ A+PS+E VRFVNSGTEA M +R+ARA+TGR++I +F GCYHGH+D LV AGSG +TLG Sbjct: 2 NFT--KSEQLYQEALEHIVGGVNSPSRSYKAVGGGAPVVMERAQGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAIQHAAENGVLYGTPTPYEITFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRDKIVKFAGCYHGHSDLVLVAAGSGPSTLG 164 The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bpback to top |