FC876184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 365 SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGK--PSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 SS + + LLN +SGEA+ G ++A++G SGSGK+TL++ LA ++ L G + +NG+ SS + AYV Q+DL F LTV ETL +AE +LP LS Sbjct: 126 SSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKD---SLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLS 225
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15 Identity = 43/106 (40.57%), Postives = 66/106 (62.26%), Query Frame = 2 Query: 353 LSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEIL 664 ++ + + LLNN+SGE + G ++A++G SGSGK+TL++ LA ++ L G +++NG+ ++ K AYV Q+DL F LTV ETL AAE +LP L Sbjct: 98 IAQTARPKTKTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKG---SLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSL 200
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ADP1_YEAST (Probable ATP-dependent permease OS=Saccharomyces cerevisiae GN=ADP1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 323 TIR*QNITCSLSDKSSKSVR-FLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 T+ +NIT S+ +S V +LN +SG KPG++LAIMG SG+GKTTLL++LA M H+SG ++VNG K++ +V Q+D LTV ET+ +A L+LP+ LS Sbjct: 383 TLSFENITYSVPSINSDGVEETVLNEISGIVKPGQILAIMGGSGAGKTTLLDILA---MKRKTGHVSGSIKVNGISMDRKSFSKIIGFVDQDDFLLPTLTVFETVLNSALLRLPKALS 497
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 365 SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEIL 664 S + LL+N+SGE + G +LA++G SGSGK+TL++ LA ++ L G + +NG+ ++ K AYV Q+DL F LTV ETL AAE +LP L Sbjct: 100 SFSKTKTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKG---SLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSL 198
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.969e-14 Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 374 SVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 + + LLN +SGEA+ G ++A++G SGSGK+TL++ LA ++ + L G + +NG+ + +K AYV Q+DL F LTV ETL +AE +LP LS Sbjct: 122 NTKVLLNGISGEAREGEMMAVLGASGSGKSTLIDALANRI---SKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLS 218
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 45/106 (42.45%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 356 SDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNG-KPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEIL 664 S + + SV+ LL++++GEA+ G +LA++G SG+GK+TL++ LAG++ L G + +NG K ++ K AYV Q+DL F LTV+ETL A+E +LP L Sbjct: 81 SRRKTASVKTLLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAED---SLKGTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSL 183
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 2 Query: 368 SKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVN-GKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 S R +L+ V+G PG +A++GPSGSGK+TLLN +AG+L S +L+G + +N GK + + +V Q+DL + LTVRETL A L+LP L+ Sbjct: 77 STEERTILSGVTGMISPGEFMAVLGPSGSGKSTLLNAVAGRLHGS---NLTGKILINDGKITKQTLKRTGFVAQDDLLYPHLTVRETLVFVALLRLPRSLT 174
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: WHITE_DROME (Protein white OS=Drosophila melanogaster GN=w PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 380 RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAY--KFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 + LL NV G A PG LLA+MG SG+GKTTLLN LA + ++ SG+ +NG+P K + AYV+Q+DLF LT RE L A +++P L+ Sbjct: 110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLT 207
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB24G_ARATH (ABC transporter G family member 24 OS=Arabidopsis thaliana GN=ABCG24 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 +L V+G KPGR+ A+MGPSG+GKT+LL+ LAG+ + LSGL+ +NGK S +YK +V Q+D+ LTV E L A+ +LP LS Sbjct: 493 VLRCVTGSMKPGRITAVMGPSGAGKTSLLSALAGKAVG---CKLSGLILINGKQESIHSYKKIIGFVPQDDVVHGNLTVEENLWFHAKCRLPADLS 585
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = 2 Query: 377 VRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNG-KPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 V+ LL++VSGEA G +LA++G SG+GK+TL++ LAG++ L G + +NG K ++ K AYV Q+DL F LTV+ETL A+E +LP LS Sbjct: 96 VKTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEG---SLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLS 192 The following BLAST results are available for this feature:
BLAST of FC876184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876184 ID=FC876184; Name=FC876184; organism=Citrus clementina; type=EST; length=671bpback to top |