FC876184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13 Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 371 KSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAY--KFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 K + L+ NV G A PG LLA+MG SG+GKTTLLN LA + ++ S + +NG P K + AYV+Q+DLF LT RE L A +++P ++ Sbjct: 96 KPRKHLIKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSARGVQISPSSVRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQATVRMPRTMT 196
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 362 KSSKSVRF-LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLP 655 K KS R LL ++ G KPG++LA+MGPSG+GK+TLL+VLA + H++G + +NGKP S + AYV Q D+ TVRE ++ +A +LP Sbjct: 933 KKKKSQRLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQRKTGG---HITGEILINGKPPSEFTNRIRAYVEQMDVLPPTQTVREAIAFSARCRLP 1029
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG5_DICDI (ABC transporter G family member 5 OS=Dictyostelium discoideum GN=abcG5 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 362 KSSKSVRF-LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLP 655 K KS R LL ++ G KPG++LA+MGPSG+GK+TLL+VLA + H++G + +NGKP S + AYV Q D+ TVRE ++ +A +LP Sbjct: 908 KKKKSQRLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQRKTGG---HITGEILINGKPPSEFTNRIRAYVEQMDVLPPTQTVREAIAFSARCRLP 1004
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB9G_ARATH (ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13 Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 251 DERNDVAEANGDGEAPVDGKVF-----PVTIR*QNITCSLSDKSSKSV---------RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLP 655 D +A+ N D P +F PVT++ +N+ ++ K S+ R +L ++G KPG +LA++GPSGSGKT+LL L G+ + + L+G + N KP S KA K +V Q+D + LTV ETL A L+LP Sbjct: 9 DVETPIAKTNDDRSLPFS--IFKKANNPVTLKFENLVYTVKLKDSQGCFGKNDKTEERTILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGR-VGEGKGKLTGNISYNNKPLS-KAVKRTTGFVTQDDALYPNLTVTETLVFTALLRLP 155
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: CDR3_CANAL (Opaque-specific ABC transporter CDR3 OS=Candida albicans GN=CDR3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 335 QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVN-GKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSV 670 +N+T ++ KS + R +LNN+ G KPG + A+MG SG+GKTTLLN L+ +L + SG VN G+ S+ YV+Q+DL TVRE L +A L+ P +S+ Sbjct: 843 RNLTYTVKIKSEE--RVILNNIDGWVKPGEVTALMGASGAGKTTLLNALSERLTTG--VITSGTRMVNGGELDSSFQRSIGYVQQQDLHLETSTVREALKFSARLRQPNSVSI 951
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 2 Query: 380 RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 + +L ++G PG +LA+MGPSGSGKTTLL ++ G+L ++ G L N P S + + +V Q+D+ QLTV ETL+ AA L+LP +S Sbjct: 104 KHILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTD----NVKGKLTYNDIPYSPSVKRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMS 196
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 56/162 (34.57%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 260 NDVAEANGDGEA----------PVDGKVFPVTIR*QNITCSLSDKSSKSVRF-------------LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSV 670 N+++ ANGD + VD K + ++ Q +D S + +LNNVSG + G L+A+MGPSGSGK+TLL++LA + ++G L VNGK +AYK +YV QED+ TV ETL A+L+LP + + Sbjct: 8 NNISLANGDSKGVQLTFKNIVYKVDNKKYKKLVKKQEKAKKKNDTESSTGDMNTGVSTTIEKELTILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRKSTG---KITGQLLVNGK-EIGEAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPGVSEI 165
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 362 KSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLP 655 K K + +L N++G + G + AIMGPSG+GKTTLL++LA +L ++ SG + +NG S +K YV Q D LTVRETL+ A+L++P Sbjct: 130 KKKKISKQILTNINGHIESGTIFAIMGPSGAGKTTLLDILAHRL----NINGSGTMYLNGNKSDFNIFKKLCGYVTQSDSLMPSLTVRETLNFYAQLKMP 225
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCGM_DICDI (ABC transporter G family member 22 OS=Dictyostelium discoideum GN=abcG22 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 45/114 (39.47%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 320 VTIR*QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLPE 658 +TI +++ S++ K K +L VSG PG L+A+ GPSGSGKTTLL++LA + + +SG + +NG + + +YV QED+ +TVRETL A+L+LP+ Sbjct: 29 LTITFKDLAYSVTVKKKKMQ--ILKGVSGTVTPGELVAVFGPSGSGKTTLLDILANRKESG---EISGAVLINGNEIDDDYKRLCSYVVQEDVLLPTITVRETLRFYADLKLPK 137
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: SNQ2_YEAST (Protein SNQ2 OS=Saccharomyces cerevisiae GN=SNQ2 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12 Identity = 59/188 (31.38%), Postives = 99/188 (52.66%), Query Frame = 2 Query: 146 VGQVLAAVAVSLLFRLFTGPGPALVTDDDS----AYGDD---DERNDV-------AEANGDGEAPVDGKVFPVTIR*QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEIL 664 +G V+ V + R G G AL+ S A+ D+ D ND+ +E++G + D +++ ++ + K R LL+NVSG PG + A+MG SG+GKTTLLN LA + + ++G + VNG+P ++ + YV+Q+D+ ++LTVRE+L +A ++ P+ L Sbjct: 779 LGYVVLKVIFTEYKRPVKGGGDALIFKKGSKRFIAHADEESPDNVNDIDAKEQFSSESSGANDEVFDDLEAKGVFIWKDVCFTIPYEGGK--RMLLDNVSGYCIPGTMTALMGESGAGKTTLLNTLAQRNVGI----ITGDMLVNGRPIDASFERRTGYVQQQDIHIAELTVRESLQFSARMRRPQHL 960 The following BLAST results are available for this feature:
BLAST of FC876184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876184 ID=FC876184; Name=FC876184; organism=Citrus clementina; type=EST; length=671bpback to top |