FC876184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: CDR4_CANAL (ABC transporter CDR4 OS=Candida albicans GN=CDR4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 2 Query: 380 RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 R +L++VSG KPG++ A+MG SG+GKTTLLN L+ +L + G+ VNG+P S+ YV+Q+DL TVRE L AA L+ P+ +S Sbjct: 862 RVILDHVSGWVKPGQVTALMGASGAGKTTLLNALSDRLTTG--VVTEGIRLVNGRPLDSSFQRSIGYVQQQDLHLETSTVREALEFAAYLRQPKSVS 956
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCGO_DICDI (ABC transporter G family member 24 OS=Dictyostelium discoideum GN=abcG24 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12 Identity = 46/117 (39.32%), Postives = 73/117 (62.39%), Query Frame = 2 Query: 338 NITCSLSDKSS---KSVRF--LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFA-YVRQEDLFFSQLTVRETLSLAAELQLPEILSV 670 NI+C ++++S K V+ +L+NV+G PG+L A+MG SGSGKT+LL++L+G+ ++ G + +NG P + + YV Q+D+ LT RE L AA L+LPE +S+ Sbjct: 458 NISCYVNERSGFFGKDVKRKQILDNVNGVCPPGQLTALMGLSGSGKTSLLDILSGRKNVG---NIDGKVLINGAPVGKNFKRISGYVTQDDIQIGTLTCREHLMFAALLKLPENMSL 571
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12 Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEI 661 +L+NVSG + G ++A+MGPSGSGK+TLL++LA + ++G + VNGK +AYK +YV QE++F TV ETL A+L+LP++ Sbjct: 235 ILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGT---ITGKILVNGK-EIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPDM 324
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12 Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPE 658 +L ++G A+PG L A+MGPSGSGK+T+L+ LA +L A+ LSG + +NG+ + AYV Q+D LTVRET+ +A ++LP+ Sbjct: 69 VLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAAN--AFLSGTVLLNGRKTKLSFGTAAYVTQDDNLIGTLTVRETIWYSARVRLPD 157
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: WHT3_CAEEL (ABC transporter ATP-binding protein/permease wht-3 OS=Caenorhabditis elegans GN=wht-3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 2 Query: 311 VFPVTIR*QNITCSLSDKS-SKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNG-KPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQL 652 V P+T+ +NI K SK + LLN VSG AKPG ++A+MG SG+GKTTL+NVL + M L +G ++VNG K + + +Q+++F LTV E L + A L++ Sbjct: 30 VTPITVTWENIEVKTRKKLFSKKQKQLLNRVSGIAKPGEMVALMGASGAGKTTLMNVLMCRNMKG--LEKNGTVKVNGTKIGKEISLISGFAQQQEIFIPTLTVDEYLMIQARLRM 143
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB28G_ARATH (ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 380 RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLP 655 + L+ V+G+ PGR+ A+MGPSG+GKTT L L G+ +P ++G++ VNGK S ++YK +V Q+D+ LTV E L +A +LP Sbjct: 513 KHLMRCVTGKLSPGRVSAVMGPSGAGKTTFLTALTGK---APGCIMTGMILVNGKVESIQSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLP 603
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: PDH1_CANGA (ATP-binding cassette transporter CGR1 OS=Candida glabrata GN=PDH1 PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 2 Query: 239 YGDDDERNDVAEANGDGEAPVDGKVFPVTIR*QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSV 670 Y ++ + + + G V QN+ + K+ VR +LNNV G KPG L A+MG SG+GKTTLL+ LA + ++G + VNG+P ++ + Y +Q+DL TVRE+L +A L+ P +S+ Sbjct: 856 YDENADSESITSGSRGGSPQVGLSKSEAIFHWQNLCYDVPIKTE--VRRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERTTMGV---ITGDVMVNGRPRDTSFSRSIGYCQQQDLHLKTATVRESLRFSAYLRQPSSVSI 995
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 2 Query: 311 VFPVTIR*QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSN-KAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 V+ V I Q C S KS + +LN ++G PG LA++GPSGSGKTTLL+ L G+L + SG + NG+P S + +V Q+D+ + LTV ETL A L+LP L+ Sbjct: 59 VYKVKIE-QTSQCMGSWKSKEKT--ILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGRLSKT----FSGKVMYNGQPFSGCIKRRTGFVAQDDVLYPHLTVWETLFFTALLRLPSSLT 171
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 380 RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAY--KFAYVRQEDLFFSQLTVRETLSLAAELQLP 655 + LL N SG A PG LLA+MG SG+GKTTLLN A + ++ S + +NG P K + AYV+Q+DLF LT RE L A +++P Sbjct: 101 KHLLKNDSGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMP 194
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 335 QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 +++T +L K + +L +V+G+ PGR+ A+MGPSG+GKTT L+ LAG+ R +GL+ +NG+ S +YK +V Q+D+ LTV E L +A +L +S Sbjct: 468 KDLTLTLKGKH----KHILRSVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKATGCTR---TGLILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMS 573 The following BLAST results are available for this feature:
BLAST of FC876184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876184 ID=FC876184; Name=FC876184; organism=Citrus clementina; type=EST; length=671bpback to top |