FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_NITSB (Triosephosphate isomerase OS=Nitratiruptor sp. (strain SB155-2) GN=tpiA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/122 (31.97%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + N+K N T+ S + LN + +DQ + +I AQN++ + G+FTGEI ++QL++ G + V+LGHSERRH+ E + I +K A+ G + C+GE Sbjct: 3 LAANFKMNHTRASTKAYIERLNAYGKQTDIDIAVFPPATALDQYETFA----DIGAQNAYAAEHGSFTGEIGLQQLQEFGIETVLLGHSERRHIFYESQEMIARKFAFYKERGFTIYYCLGE 120
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBP (Triosephosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tpiA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T ++ L A ++++ V + D ++ + AQN++ A TGEIS QL ++G + V++GHSERR +GE +F K +Y L GL V+ C+GE Sbjct: 3 KKIIAGNWKMNLTLAEAKEITKGLLSACDSSSYEIMVFPSALHLESVASIARDSQLIVGAQNAYQSGLTAMTGEISPVQLAELGIQTVLVGHSERRQFLGETSEFDNTKISYFLKHGLRVVYCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBA (Triosephosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=tpiA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T ++ L A ++++ V + D ++ + AQN++ A TGEIS QL ++G + V++GHSERR +GE +F K +Y L GL V+ C+GE Sbjct: 3 KKIIAGNWKMNLTLAEAKEITKGLLSACDSSSYEIMVFPSALHLESVASIARDSQLIVGAQNAYQSGLTAMTGEISPVQLAELGIQTVLVGHSERRQFLGETSEFDNTKISYFLKHGLRVVYCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACPL (Triosephosphate isomerase OS=Lactobacillus plantarum GN=tpiA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND-----AKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK N T V+ + D +K+E ++ K S ++IAA+N++ GAFTGE S L D+G +VV+GHSERR E D+ I KKA G+ I C GE Sbjct: 6 IAGNWKMNKTASEALAFVNAVKDQLPDPSKVESVVAAPALFLQEMVEAAKGS---DLKIAAENAYFEDAGAFTGETSPAALADLGVDYVVIGHSERRGYFHETDEDINKKAHAIFKNGMKPIICCGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_GRABC (Triosephosphate isomerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tpiA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 44/125 (35.20%), Postives = 61/125 (48.80%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXX--FVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK NG + + L+ L DA I Q + L IE+ AQ+ + + GA TG++S E L + G WV+LGHSERR GE + + +K A GL I C+GE Sbjct: 5 IAGNWKMNGLRSTSESLLQALRDAAPHALRNCDMLICPPATLIAQAASVLAGSGIEVGAQDCHMARSGAHTGDLSAEMLVEAGAHWVILGHSERRRDHGELSETVREKVIAARQFGLTPIVCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS2_RHILO (Triosephosphate isomerase 2 OS=Rhizobium loti GN=tpiA2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 1 Query: 304 FFVGGNWKCNGTKESITKLVSDLND--AKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 ++VG +WK N T L + F + +VK +L+ RI++ AQN GA+TGEIS L+D G V LGHSERR GE D+ +G K A A+ G+ + C+GE Sbjct: 5 YWVGTSWKMNKTLAEALDFAERLAGFIPGFDDRIQPFVIPPFTAVREVKRALSSTRIKVGAQNMHWADAGAWTGEISPPMLRDCGLDLVELGHSERREHFGETDRTVGLKTAAAVKHGMIPLICVGE 131
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEHT (Triosephosphate isomerase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tpiA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 37/128 (28.91%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 292 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 ++ K V GNWK NG+ E + ++ +N+ K + + + ++ + ++N+ GAFTGE+ + +K++G ++V++GHSERR + E + + K A A GL I C+GE Sbjct: 2 AARKAMVAGNWKMNGSLELVKQMSDAINNVKSNEIDIVLFPPFPLVSAMIASGVSTGTQTVSENT----PGAFTGEVDAQLIKELGAQYVLVGHSERRSIYKESNDVVAAKFARAQQVGLTPILCVGE 125
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PORGI (Triosephosphate isomerase OS=Porphyromonas gingivalis GN=tpiA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXX---FVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K V GNWK N T + L +L DA L+ F+++ + ++ T RI +AA+N + GA+TGE+S + G ++V++GHSERR E + +K ALS GL I C+GE Sbjct: 3 KNIVAGNWKMNKTLQEGLALAKEL-DAALKGRTINCDVIIGTPFIHLASIAAAIDTTRIGVAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PORG3 (Triosephosphate isomerase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=tpiA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXX---FVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K V GNWK N T + L +L DA L+ F+++ + ++ T RI +AA+N + GA+TGE+S + G ++V++GHSERR E + +K ALS GL I C+GE Sbjct: 3 KNIVAGNWKMNKTLQEGLALAKEL-DAALKGRTISCDVIIGTPFIHLASIAAAIDTTRIGVAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGE (Triosephosphate isomerase OS=Mycoplasma genitalium GN=tpiA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 1 Query: 316 GNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 GNWK N + V KL +V++ ++K ++D + + AQ++ + G++TG +S QL+DIG ++GHSERR E I +K L + V+ CIGE Sbjct: 8 GNWKTNKNLKDAVSFVEQFQQNKLNYNAKIGIAPVYVHLTEIKKIISDSLLLFAQDANFIESGSYTGTVSFTQLQDIGVNNSIIGHSERRKYYNETSAVINQKLFACLKASMQVVLCIGE 127 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |