FC876200

Overview
NameFC876200
Unique NameFC876200
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length362
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  QAG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  QAG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_YERE8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  QAG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDLDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G ++ E+L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNATREELLAVGRELRARHWQQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_ALHEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 41/100 (41.00%), Postives = 65/100 (65.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H++GYPR+G +RELK A E++W G+    +L++   +LR+  W+    AG+ ++    F++YD VL+ +A+LGAVPPR+   G  +  D  F MARG A
Sbjct:    4 THVLGYPRIGARRELKRATEAYWKGEIDQAELERTGRELRARHWQAQRDAGLDWVTVGDFAFYDHVLNVSALLGAVPPRFGDAGETVDLDTTFRMARGRA 103
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALPK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALG2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
The following BLAST results are available for this feature:
BLAST of FC876200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_YERPA6.762e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERP36.762e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERE86.762e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALAR6.762e-2044.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALHEH6.762e-2041.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALSV8.831e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPK8.831e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPB8.831e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPA8.831e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALG28.831e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32001F02EF DevOvary1 Citrus clementina cDNA clone C32001F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876200 ID=FC876200; Name=FC876200; organism=Citrus clementina; type=EST; length=362bp
TCTCGACTCTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCAT
CTCACATCGTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTC
GCGTTGGAATCCTTCTGGGATGGCAAGAGCAGCGCTGAGGATTTGCAAAA
GGTGTCCGCTGATCTCAGATCCTCCATCTGGAAACAGATGTCCCAGGCCG
GGATCAAATACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTC
GACACCACCGCAATGCTCGGTGCCGTGCCCCCGAGGTATAACTGGAACGG
CGGCGAGATTGGATTTGATGTTTACTTCTCCATGGCCAGAGGAAACGCCT
CTGTTCCCGCTA
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