FC876200

Overview
NameFC876200
Unique NameFC876200
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length362
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALEP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella agona (strain SL483) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_LISIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria innocua GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 2
Query:   41 KMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNASVPA 361
            K  S  +GYPR+G KRE K ALE FW+G  S E+L   +  LR    K+    GI  IP   FS+YDQVLDT+   G +P R+  +GG++  + YF +ARG +   A
Sbjct:    3 KAISSNLGYPRLGEKREWKRALEKFWNGAISEEELLAETKALRLHALKKQQDKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHDGGKVSLNTYFDIARGKSDAVA 109          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 40/101 (39.60%), Postives = 70/101 (69.31%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGE-IGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A+E++W GK +A DL++   +LR++ W++ + +G++++P   F++YD +L+ T +LGAVP R+    G+ +  D  F M RG A
Sbjct:    4 THNLGFPRIGAQRELKRAVEAYWSGKKTAADLEETGRELRAAHWQRQAASGLQWVPVGDFAWYDHILEWTTLLGAVPARFGQPEGQPVSLDTLFRMGRGRA 104          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 343
            S ++G+PR+GP RELK A E +W+GK + ++L KV  DLR+  WK   +AG+  IPSN FS+YDQVLD + +   +P RY         D  F+M RG
Sbjct:    4 SAVLGFPRIGPNRELKKATEGYWNGKITVDELFKVGKDLRTQNWKLQKEAGVDIIPSNDFSFYDQVLDLSLLFNVIPDRYT-KYDLSPIDTLFAMGRG 100          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +HI+GYPR+G KRELKFA E +W G     +L+KV ADLR+  W+  ++AG+ +  +  F++YD VL TT +LG VP R+   GG    D  F + RG +
Sbjct:    5 THILGYPRIGEKRELKFAQEKYWRGDIDQTELKKVGADLRAKNWQTQTEAGLSFTTAGDFAWYDHVLTTTLLLGHVPKRH--AGGFPNLDTLFKVGRGQS 102          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G  RELK A ES+W G  S  +L  V  +LR+  W+Q + AG++ +P   F++YDQVL T+ +LG +PPR+    G +  D  F +ARG A
Sbjct:    5 NHTLGFPRIGLNRELKKAQESYWAGNISQAELLAVGKELRARHWQQQANAGVELLPVGDFAWYDQVLGTSLLLGNIPPRHRNEDGRLDLDTLFRVARGRA 104          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella choleraesuis GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSMDIDTLFRIGRGRA 104          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W+Q  QAG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTQEELLAVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPARHQNADGTIDLDTLFRLGRGRA 104          
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALTY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella typhimurium GN=metE PE=3 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G ++ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNTTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104          
The following BLAST results are available for this feature:
BLAST of FC876200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_SALEP8.831e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALA48.831e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISIN8.831e-2043.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPD8.831e-2039.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST1.153e-1945.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBPA1.153e-1945.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH1.153e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALCH1.506e-1945.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP51.967e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALTY1.967e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32001F02EF DevOvary1 Citrus clementina cDNA clone C32001F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876200 ID=FC876200; Name=FC876200; organism=Citrus clementina; type=EST; length=362bp
TCTCGACTCTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCAT
CTCACATCGTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTC
GCGTTGGAATCCTTCTGGGATGGCAAGAGCAGCGCTGAGGATTTGCAAAA
GGTGTCCGCTGATCTCAGATCCTCCATCTGGAAACAGATGTCCCAGGCCG
GGATCAAATACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTC
GACACCACCGCAATGCTCGGTGCCGTGCCCCCGAGGTATAACTGGAACGG
CGGCGAGATTGGATTTGATGTTTACTTCTCCATGGCCAGAGGAAACGCCT
CTGTTCCCGCTA
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