FC876200

Overview
NameFC876200
Unique NameFC876200
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length362
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALTI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella typhi GN=metE PE=3 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G ++ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNTTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALHS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella heidelberg (strain SL476) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G ++ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNTTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SALDC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella dublin (strain CT_02021853) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G ++ E L  V  +LR+  W+Q  QAGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNTTREALLTVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SHIDS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  QAGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SHIBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  QAGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_SHIB3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  QAGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_ESCF3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  QAGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W+Q   AG+  +P   F++YD VL T+ MLG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLQRELKKAQESYWAGNSTQEELLTVGRELRARHWQQQKDAGVNLLPVGDFAWYDHVLTTSLMLGNVPARHQNKDGSVDLDTLFRLGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_ECOLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain K12) GN=metE PE=1 SV=6)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  QAGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876200 vs. ExPASy Swiss-Prot
Match: METE_ECOL5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:   50 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSQAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 349
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  QAGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
The following BLAST results are available for this feature:
BLAST of FC876200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_SALTI1.967e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALHS1.967e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALDC1.967e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIDS2.570e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIBS2.570e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIB32.570e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ESCF32.570e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT92.570e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLI2.570e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL52.570e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32001F02EF DevOvary1 Citrus clementina cDNA clone C32001F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876200 ID=FC876200; Name=FC876200; organism=Citrus clementina; type=EST; length=362bp
TCTCGACTCTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCAT
CTCACATCGTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTC
GCGTTGGAATCCTTCTGGGATGGCAAGAGCAGCGCTGAGGATTTGCAAAA
GGTGTCCGCTGATCTCAGATCCTCCATCTGGAAACAGATGTCCCAGGCCG
GGATCAAATACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTC
GACACCACCGCAATGCTCGGTGCCGTGCCCCCGAGGTATAACTGGAACGG
CGGCGAGATTGGATTTGATGTTTACTTCTCCATGGCCAGAGGAAACGCCT
CTGTTCCCGCTA
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