FC876201

Overview
NameFC876201
Unique NameFC876201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 414.075 bits (1063), Expect = 3.679e-115
Identity = 203/233 (87.12%), Postives = 220/233 (94.42%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDN RLA+A+IGKLMF QFSELVND+YNNGLPSNL+ GRNPSLDYGFKG+EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSL LIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENL++ VKNTVSQVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DD CSA YPLMQKLRQVLV+HAL++GENEK ANSSI
Sbjct:  379 DNPLIDVSRNKALHGGNFQGTPIGVSMDNARLALASIGKLMFGQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGSEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLDLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGTNGELHPSRFCEKDLLRVVDREYVFAYADDACSANYPLMQKLRQVLVDHALQNGENEKNANSSI 611
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 6.275e-115
Identity = 202/233 (86.70%), Postives = 220/233 (94.42%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++ILKLMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQV+K++LT G +GELHPSRFCEKDLLK  DRE++F+YIDDPCSATYPLMQKLRQVLV+HAL + E EK  NSSI
Sbjct:  380 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYIFSYIDDPCSATYPLMQKLRQVLVDHALVNAECEKDVNSSI 612
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 6.275e-115
Identity = 201/233 (86.27%), Postives = 220/233 (94.42%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKL+FAQFSELVNDFYNNGLPSNLS  RNPSLDYGFKG+EIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++IL+LMSSTFL+ALCQA+DLRHLEENLK++VKN VSQVAK+ LT G +GELHPSRFCEKDLL+  DREHVFAYIDDPCSATYPLMQKLRQVLV+HAL +GE+EK  N+SI
Sbjct:  390 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAVDLRHLEENLKNSVKNIVSQVAKRTLTTGVNGELHPSRFCEKDLLRVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSI 622
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 413.305 bits (1061), Expect = 6.275e-115
Identity = 203/233 (87.12%), Postives = 220/233 (94.42%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT+EAVDILKLMS+TFLVA+CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE V+ Y DDPCSATYPL+QKLRQV+V+HAL +GE+EK A +SI
Sbjct:  392 DNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVAICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYPLIQKLRQVIVDHALINGESEKNAVTSI 624
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 412.92 bits (1060), Expect = 8.196e-115
Identity = 202/233 (86.70%), Postives = 218/233 (93.56%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL+   NPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT+EAVDILKLMS+TFLV +CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE VF Y+DDPCSATYPLMQ+LRQV+V+HAL +GE EK A +SI
Sbjct:  384 DNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTASSNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVGICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYPLMQRLRQVIVDHALSNGETEKNAVTSI 616
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.070e-114
Identity = 201/233 (86.27%), Postives = 220/233 (94.42%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDN RLA+A+IGKLMFAQFSELVND+YNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK+ VKNTVSQVAK+ LT+GA+GELHP+RFCEK+LL+  DRE++FAY DDPCS  YPLMQKLRQVLV+HA+ +GE+EK  NSSI
Sbjct:  382 DNPLIDVSRNKALHGGNFQGTPIGVSMDNARLALASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKNAVKNTVSQVAKRTLTMGANGELHPARFCEKELLRIVDREYLFAYADDPCSCNYPLMQKLRQVLVDHAMNNGESEKNVNSSI 614
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 1.398e-114
Identity = 201/233 (86.27%), Postives = 221/233 (94.85%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLP NL+ GRNPSLDYG KGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK+ VKNTVSQVAKK L +GA+GELHP+RFCEK+LL+  +RE++F Y DDPCS+TYPLMQKLRQVLV+HA+K+GE+EK  NSSI
Sbjct:  388 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPLNLTAGRNPSLDYGLKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKNAVKNTVSQVAKKTLAMGANGELHPARFCEKELLQVVEREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNLNSSI 620
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 5.312e-114
Identity = 200/233 (85.84%), Postives = 219/233 (93.99%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKL+FAQFSELVNDFYNNGLPSNLS  RNPSLDYGFKG+EIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKN VS VAK+ LT G +GELHPSRFCEKDLL+  DREHVF+YIDDPCSATYPLMQKLRQVLV+HAL +GE+EK  N+SI
Sbjct:  391 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNMVSHVAKRTLTTGINGELHPSRFCEKDLLRVVDREHVFSYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSI 623
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 409.838 bits (1052), Expect = 6.938e-114
Identity = 198/233 (84.98%), Postives = 221/233 (94.85%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+A+IGKL+FAQFSELVND+YNNGLPSNL+ GRNPSLDYGFKG EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVD+LKLMSST+LVALCQAIDLRHLEENLK+ V+NTV+QVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DDPCSA YPL QKLRQVLV+HAL++GE+EK  ++SI
Sbjct:  375 DNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLALASIGKLIFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGVEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDVLKLMSSTYLVALCQAIDLRHLEENLKNAVRNTVNQVAKRTLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCSANYPLFQKLRQVLVDHALQNGEHEKNVSTSI 607
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 9.061e-114
Identity = 200/233 (85.84%), Postives = 221/233 (94.85%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTA+AVDILK+MSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+GA+GELHP+RF EK+LL+  DRE++FAY DDPCS+ YPLMQKLRQVLV+ A+K+GE+EK  NSSI
Sbjct:  371 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAKAVDILKIMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTMGANGELHPARFSEKELLRVVDREYLFAYADDPCSSNYPLMQKLRQVLVDQAMKNGESEKNVNSSI 603
The following BLAST results are available for this feature:
BLAST of FC876201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PAL2_TOBAC3.679e-11587.12Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL1_SOYBN6.275e-11586.70Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL1_PEA6.275e-11586.27Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL1_ARATH6.275e-11587.12Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]
PAL2_ARATH8.196e-11586.70Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PAL1_TOBAC1.070e-11486.27Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL5_SOLLC1.398e-11486.27Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL2_PEA5.312e-11485.84Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL2_IPOBA6.938e-11484.98Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]
PAL1_SOLLC9.061e-11485.84Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionC32001F04EF DevOvary1 Citrus clementina cDNA clone C32001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876201 ID=FC876201; Name=FC876201; organism=Citrus clementina; type=EST; length=701bp
GACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCAA
TTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTA
TTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAAC
GATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCC
TAGCCTGGATTATGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATT
GTTCGGAGCTCCAATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGT
GCTGAACAGCACAACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAG
GAAGACTGCTGAAGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCT
TGGTAGCGCTTTGCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTG
AAGCATACAGTCAAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAAC
CGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATC
TGCTCAAAGCGGCTGATCGCGAACACGTCTTTGCATACATTGATGACCCC
TGCAGTGCTACCTATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGA
GCACGCACTGAAACATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCT
T
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