FC876201

Overview
NameFC876201
Unique NameFC876201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:1285..1985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 407.527 bits (1046), Expect = 3.443e-113
Identity = 202/234 (86.32%), Postives = 223/234 (95.30%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTR-LAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNF G+PIGVSMDNT  LAIA+IGKLMFAQFSELVND+YNNGLPSNL+GGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAV+IL +MS+T+LVALCQAIDLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSRFCEKDLLK  DRE+VF YIDDPCSATYPLMQKLRQVLV+HAL +GE E+ +++SI
Sbjct:  237 DNPLIDVSRNKALHGGNFPGSPIGVSMDNTLVLAIASIGKLMFAQFSELVNDYYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILNVMSTTWLVALCQAIDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRFCEKDLLKVVDREYVFTYIDDPCSATYPLMQKLRQVLVDHALMNGEKEQNSSTSI 470          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 5.873e-113
Identity = 197/233 (84.55%), Postives = 220/233 (94.42%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDV+R+KALHGGNFQGTPIGVSMDN+RLA+A+IGKL+FAQFSELVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVD+LKLMSST+LVALCQAIDLR LEENL++ VKN V+QVAK+ LTVGA+GELHP+RFCEKDLL+  DRE+VFAY DDPCSA YPLMQKLRQ LV+HAL++GENEK   +SI
Sbjct:  374 DNPLIDVARSKALHGGNFQGTPIGVSMDNSRLALASIGKLLFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDVLKLMSSTYLVALCQAIDLRFLEENLRNAVKNAVTQVAKRTLTVGANGELHPARFCEKDLLRVVDREYVFAYADDPCSANYPLMQKLRQALVDHALQNGENEKNTGTSI 606          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 1.308e-112
Identity = 200/233 (85.84%), Postives = 217/233 (93.13%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLI VSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFS+LVND+YNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT EA++ILKLMSSTFLVALCQAIDLRHLEENLK+TVKN VSQVAK+ LT G +GELHPSRFCEK LLK  +RE+ FAYIDDPCS TYPLMQKLRQVLV++AL +GENEK  N+SI
Sbjct:  379 DNPLISVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSDLVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEALEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKALLKVVEREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNLNTSI 611          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 402.519 bits (1033), Expect = 1.108e-111
Identity = 198/233 (84.98%), Postives = 217/233 (93.13%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGV+MDN+RLAIA+IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS+T+LVALCQA+DLRHLEENLK  VK+ VSQVAK+VLTVGA+GELHPSRF E+D+L+  DRE+VF+Y DDPCS TYPLMQKLR +LV+HAL   E E  + +S+
Sbjct:  374 DNPLIDVSRNKALHGGNFQGTPIGVAMDNSRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTYLVALCQAVDLRHLEENLKKAVKSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYPLMQKLRHILVDHALADPEREANSATSV 606          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 400.979 bits (1029), Expect = 3.223e-111
Identity = 197/233 (84.55%), Postives = 216/233 (92.70%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSL LIS+RKT E+++ILKLMSSTFL+ LCQAIDLRHLEENLK +VKNTVSQV+K+ LT G +GELHPSRFCEKDLLK  DRE+VF+YIDDP S TYPLMQKLRQVLV+HAL + ENEK  N+SI
Sbjct:  173 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLDLISARKTNESIEILKLMSSTFLMGLCQAIDLRHLEENLKSSVKNTVSQVSKRTLTTGGNGELHPSRFCEKDLLKVVDREYVFSYIDDPYSGTYPLMQKLRQVLVDHALINAENEKDVNTSI 405          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 1.599e-110
Identity = 196/233 (84.12%), Postives = 215/233 (92.27%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGV+MDNTRLAIA+IGKL+FAQFSELVND+YNNGLPSNL+G RNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKT+EAV+ILKLMSS+FLVAL QA+DLRH+EEN++  VKNTVSQVAK+ LT G +GELHPSRF EKDLL+  DRE+VFAY DDPC  TYPLMQKLR+ LV HAL +GENEK  N+SI
Sbjct:  377 DNPLIDVSRNKALHGGNFQGTPIGVAMDNTRLAIASIGKLLFAQFSELVNDYYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVEILKLMSSSFLVALFQAVDLRHIEENVRLAVKNTVSQVAKRTLTTGVNGELHPSRFSEKDLLRVVDREYVFAYADDPCLTTYPLMQKLRETLVGHALDNGENEKDVNTSI 609          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 7.938e-110
Identity = 197/233 (84.55%), Postives = 215/233 (92.27%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVND YNNGLPSNL+GGRNPSLDYGFKGAEIAMASYCSELQFL    TNHVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMS+TFLV LC ++DLRH+EENLK+TVK +VSQ+  +VLT+G +GELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPLMQKLRQVLVEHAL +GE  + + +SI
Sbjct:  378 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDLYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLDQSCTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSTTFLVGLCHSVDLRHIEENLKNTVKISVSQL-PRVLTMGFNGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLMQKLRQVLVEHALVNGEKVRNSTTSI 609          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 7.938e-110
Identity = 195/233 (83.69%), Postives = 215/233 (92.27%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGV+MDNTRLAIAAIGKL+FAQFSELVND+YNNGLPSNL+G R+PSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKT+EAV+ILKLMSS+FLVALCQA+DLRH+EEN++  VK TVSQVAKK L +G  G LHPSRF EK+LL+  DRE+VFAY DDPCSATYPLMQKLR+VLV HAL +  NEK A++SI
Sbjct:  372 DNPLIDVSRNKALHGGNFQGTPIGVAMDNTRLAIAAIGKLLFAQFSELVNDYYNNGLPSNLTGSRDPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVEILKLMSSSFLVALCQAVDLRHIEENVRLAVKKTVSQVAKKTLNIGVDGVLHPSRFSEKELLRVVDREYVFAYADDPCSATYPLMQKLREVLVSHALANSGNEKDASTSI 604          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.016e-109
Identity = 198/233 (84.98%), Postives = 213/233 (91.42%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQ  PIGV+MDNTRLAIA+IGKL+FAQFSELVND+YNNGLPS L+G  NPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKT+EAVDILKLMSSTFLVALCQAIDLRHLEENLK  VK TVS VAK+ LTV  +GELHPSRF EKDLL   DRE++F+YIDDPC ATYPLMQKLR  LVEHALK+GE E++AN+SI
Sbjct:  377 DNPLIDVSRNKALHGGNFQELPIGVAMDNTRLAIASIGKLIFAQFSELVNDYYNNGLPSILTGSSNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSSTFLVALCQAIDLRHLEENLKIVVKTTVSNVAKRTLTVSPNGELHPSRFSEKDLLTVVDREYLFSYIDDPCLATYPLMQKLRAELVEHALKNGERERSANTSI 609          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 4.356e-108
Identity = 195/233 (83.69%), Postives = 208/233 (89.27%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSR KA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFL NPVTNHVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMSSTFLVALCQAIDLRHLEEN+K+ VK+ V  VA+K L+   +G LH +RFCEKDLL   DRE VFAY DDPCSA YPLMQK+R VLVEHAL +GE E    +S+
Sbjct:  367 DNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKTVARKTLSTDNNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALANGEAEAHVETSV 599          
The following BLAST results are available for this feature:
BLAST of FC876201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PAL4_POPKI3.443e-11386.32Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PAL1_IPOBA5.873e-11384.55Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL2_PHAVU1.308e-11285.84Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL4_ARATH1.108e-11184.98Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]
PAL1_PHAVU3.223e-11184.55Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PAL1_LITER1.599e-11084.12Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PAL2_POPKI7.938e-11084.55Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL2_LITER7.938e-11083.69Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL1_RUBID3.016e-10984.98Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PALY_WHEAT4.356e-10883.69Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]

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Properties
Property NameValue
Genbank descriptionC32001F04EF DevOvary1 Citrus clementina cDNA clone C32001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876201 ID=FC876201; Name=FC876201; organism=Citrus clementina; type=EST; length=701bp
GACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCAA
TTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTA
TTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAAC
GATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCC
TAGCCTGGATTATGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATT
GTTCGGAGCTCCAATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGT
GCTGAACAGCACAACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAG
GAAGACTGCTGAAGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCT
TGGTAGCGCTTTGCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTG
AAGCATACAGTCAAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAAC
CGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATC
TGCTCAAAGCGGCTGATCGCGAACACGTCTTTGCATACATTGATGACCCC
TGCAGTGCTACCTATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGA
GCACGCACTGAAACATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCT
T
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