FC876201

Overview
NameFC876201
Unique NameFC876201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:1285..1985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_AGABI (Phenylalanine ammonia-lyase (Fragment) OS=Agaricus bisporus GN=palA PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.698e-33
Identity = 68/134 (50.75%), Postives = 99/134 (73.88%), Query Frame = 1
Query:   40 HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLE 441
            HGGNFQ   +  +M+ TRLA+  IGK++FAQ +EL+N   N GLP +L+   +PSL+Y  KG +IA A+Y +EL +LA+PV+ H+QSAE HNQ VNS+ L+S+R T  ++D+L ++ +T+L  LCQA+DLR L+
Sbjct:    7 HGGNFQAMAVTNAMEKTRLALHHIGKIIFAQSTELINPATNRGLPPSLAAS-DPSLNYHVKGVDIATAAYAAELGYLASPVSTHIQSAEMHNQAVNSMALVSARATINSIDVLSMLVATYLYNLCQALDLRALQ 139          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_USTMA (Phenylalanine ammonia-lyase OS=Ustilago maydis GN=PAL1 PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = 1
Query:    1 DNPLIDV--SRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLE 441
            DNP+ID      +  HGGNFQ   +  +++  RLA+ A+GK+ F Q +ELVN   N GLP+NL+   + SL++  KG +IA+AS  SEL FL NPV+ HVQSAE  NQ +NSL LIS R+T +A++ L ++ +  L  LCQA+D+R L+
Sbjct:  392 DNPMIDPYDGDGRIHHGGNFQAMAMTNAVEKIRLALCAMGKMTFQQMTELVNPAMNRGLPANLASTPDLSLNFHAKGIDIALASVTSELMFLGNPVSTHVQSAEMANQAINSLALISGRQTLQAIECLSMIQAWSLYLLCQALDIRALQ 540          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_AMAMU (Phenylalanine ammonia-lyase OS=Amanita muscaria GN=PAL PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.637e-30
Identity = 70/147 (47.62%), Postives = 100/147 (68.03%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLE 441
            DNPLID    ++ HGGNFQ   +  +M+ TRLA+  +GKL+F+Q +ELVN   N GLP +++   +PSL+Y  KG +IA A+Y +E    A P   H+QSAE HNQ VNSL LIS+R T  ++++L  + +++L  LCQA+DLR L+
Sbjct:  412 DNPLIDGETGESHHGGNFQAMAVTNAMEKTRLALHHVGKLLFSQSTELVNPAMNRGLPPSVA-ATDPSLNYHAKGLDIATAAYVAE----ATPGPTHIQSAEMHNQAVNSLALISARATITSLEVLTSLIASYLYILCQALDLRALQ 553          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH1_FUSNN (Histidine ammonia-lyase 1 OS=Fusobacterium nucleatum subsp. nucleatum GN=hutH1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLK 558
            DNP+I V  ++ + GGNF G P+ +  D   +A++ +  +   +  ++VN   NNGLP+ L   GG N     GF   + + AS  SE + LA+P +        + +D  S+G ++++K+ +  + ++ +    L+  CQAIDL+  ++ L    K    +V K +  V     ++      +DL+K
Sbjct:  316 DNPIIFVDTDEVISGGNFHGQPMALPFDFLGIALSEMANVSERRIEKMVNPAINNGLPAFLVEKGGLNS----GFMIVQYSAASLVSENKVLAHPASVDSIPTSANQEDHVSMGSVAAKKSKDIFENVRKVIGMELITACQAIDLKEAKDKLSPATKVAYDEVRKIISYVSEDRPMYIDIHAAEDLIK 499          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HALL_DICDI (hal-like protein DDB_G0273787/DDB_G0273081 OS=Dictyostelium discoideum GN=DDB_G0273787 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 57/170 (33.53%), Postives = 90/170 (52.94%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAE-AVDILKLMSSTFLVALCQAIDLRHLE-ENLKHTVKNTVSQVAKKVLTV 504
            DNPLID      L GGNF G  I   MD  +L I+ +   + +  + +++  ++ GLP++LS   NP +  G+KG +I+  S    L+  A P   H  + EQ NQD+ SLGL S+   A   + +  ++S T ++A  QAI LR    EN K  + N V ++   ++ +
Sbjct:  332 DNPLIDPYYGDVLSGGNFMGNHIARIMDGIKLDISLVANHLHSLVALMMHSEFSKGLPNSLSP--NPGIYQGYKGMQISQTSLVVWLRQEAAPACIHSLTTEQFNQDIVSLGLHSANGAASMLIKLCDIVSMTLIIAF-QAISLRMKSIENFK--LPNKVQKLYSSIIKI 496          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_TREDE (Histidine ammonia-lyase OS=Treponema denticola GN=hutH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 46/153 (30.07%), Postives = 79/153 (51.63%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHT 459
            DNPL+    +  + GGNF G PI ++MD   +A++ +  +   +   LVN   N GLP+ L    N  ++ GF   +   AS  SE + LA+P +    ++  + +D  S+G  ++RK  E V  ++ + +   +   QA DLR +++  K T
Sbjct:  312 DNPLVFPDNHDVISGGNFHGQPIAITMDFLGIAVSELANISERRIERLVNPQLNGGLPAFLI--ENGGVNSGFMIPQYTAASLVSENKVLAHPASVDSITSSGNKEDHVSMGTTAARKITEIVKNVRHVLAIEWLTAAQACDLRGVKKYGKGT 462          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_STRGC (Histidine ammonia-lyase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=hutH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 432
            DNP+I       + GGNF G P+    D   +AI+ IG +   +   LVN   +  LPS L   ++P L+ GF   + A AS  SE + LA+P +     + ++ +D  S+G  ++RK AE +   + + +T ++A CQA+DL+
Sbjct:  312 DNPII-TKEGHVISGGNFHGEPMAQPFDFLGIAISEIGNVSERRVERLVNSQLSK-LPSFLV--KHPGLNSGFMITQYACASLASENKVLAHPASVDSIPSCENQEDFVSMGTTAARKAAEILKNSRRIVATEIMAACQALDLK 451          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_NATTJ (Histidine ammonia-lyase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hutH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 48/155 (30.97%), Postives = 77/155 (49.68%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVK 465
            DNPLI    N+ + GGNF G P+ + MD   +AIA +  +   +   LVN   N GLP  L   ++  +  GF  A+   AS  SE + LA+P +     +  + +D  S+G I +RK    ++  + + +  L+   QA+D R   ++   T K
Sbjct:  309 DNPLIFPQENEVISGGNFHGQPLALPMDYMSMAIAELANVAERRIERLVNPNLNFGLPPFLI--KDGGVSSGFMIAQYTAASLVSENKSLAHPASVDSIPSSANQEDHVSMGTIGARKALSILENTEKVLAIELLCASQALDYRQPRQSGSGTRK 461          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_RHOCS (Histidine ammonia-lyase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=hutH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 432
            DNPL+       L GGNF   P+ ++ D   LA+A IG L   + + LV+  +N GLP+ L   GG    L+ GF  A++  A+  SE + LA+P +        + +D  S+   ++R+  E  D    + +  L+A CQ ID R
Sbjct:  313 DNPLVFPDDGDILSGGNFHAEPVAMAADQIALALAEIGSLSERRTAMLVDPHHNGGLPAFLVTDGG----LNSGFMIAQVTAAALASENKGLAHPASVDSIPTSANQEDHVSMATWAARRLLEMADNAAGIVAVELLAACQGIDFR 454          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_STRSV (Histidine ammonia-lyase OS=Streptococcus sanguinis (strain SK36) GN=hutH PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 47/144 (32.64%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 432
            DNP+I       + GGNF G P+    D   +AI+ IG +   +   LVN   +  LPS L   ++P L+ GF   + A AS  SE + L++P +     + ++ +D  S+G  ++RK AE +   + + +T ++A CQA+DL+
Sbjct:  312 DNPII-TKEGHVISGGNFHGEPMAQPFDFLGIAISEIGNVSERRVERLVNSQLSK-LPSFLV--KHPGLNSGFMITQYACASLASENKVLSHPASVDSIPSCENQEDFVSMGTTAARKAAEILKNSRRIVATEIMAACQALDLK 451          
The following BLAST results are available for this feature:
BLAST of FC876201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PALY_AGABI2.698e-3350.75Phenylalanine ammonia-lyase (Fragment) OS=Agaricus... [more]
PALY_USTMA1.134e-3147.65Phenylalanine ammonia-lyase OS=Ustilago maydis GN=... [more]
PALY_AMAMU1.637e-3047.62Phenylalanine ammonia-lyase OS=Amanita muscaria GN... [more]
HUTH1_FUSNN3.914e-1627.66Histidine ammonia-lyase 1 OS=Fusobacterium nucleat... [more]
HALL_DICDI3.314e-1533.53hal-like protein DDB_G0273787/DDB_G0273081 OS=Dict... [more]
HUTH_TREDE2.010e-1230.07Histidine ammonia-lyase OS=Treponema denticola GN=... [more]
HUTH_STRGC2.626e-1233.33Histidine ammonia-lyase OS=Streptococcus gordonii ... [more]
HUTH_NATTJ2.626e-1230.97Histidine ammonia-lyase OS=Natranaerobius thermoph... [more]
HUTH_RHOCS3.429e-1232.88Histidine ammonia-lyase OS=Rhodospirillum centenum... [more]
HUTH_STRSV5.849e-1232.64Histidine ammonia-lyase OS=Streptococcus sanguinis... [more]

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Properties
Property NameValue
Genbank descriptionC32001F04EF DevOvary1 Citrus clementina cDNA clone C32001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876201 ID=FC876201; Name=FC876201; organism=Citrus clementina; type=EST; length=701bp
GACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCAA
TTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTA
TTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAAC
GATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCC
TAGCCTGGATTATGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATT
GTTCGGAGCTCCAATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGT
GCTGAACAGCACAACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAG
GAAGACTGCTGAAGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCT
TGGTAGCGCTTTGCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTG
AAGCATACAGTCAAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAAC
CGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATC
TGCTCAAAGCGGCTGATCGCGAACACGTCTTTGCATACATTGATGACCCC
TGCAGTGCTACCTATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGA
GCACGCACTGAAACATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCT
T
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