FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUME (60 kDa chaperonin OS=Brucella melitensis GN=groL PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.652e-65 Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+IEKS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUMB (60 kDa chaperonin OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=groL PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.652e-65 Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+IEKS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUAB (60 kDa chaperonin OS=Brucella abortus GN=groL PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.652e-65 Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+IEKS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUA2 (60 kDa chaperonin OS=Brucella abortus (strain 2308) GN=groL PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.652e-65 Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+IEKS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUA1 (60 kDa chaperonin OS=Brucella abortus (strain S19) GN=groL PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.652e-65 Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+IEKS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACTSZ (60 kDa chaperonin OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=groL PE=3 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.157e-65 Identity = 125/216 (57.87%), Postives = 164/216 (75.93%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML GV+ +A+AVKVT+GPKGRNVI++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AV+S+LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T E++NP Sbjct: 3 AKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAVVSELKALSKPCETSKEIEQVGTISANSDSIVGQLIAQAMEKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETATVEMDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACEP3 (60 kDa chaperonin OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=groL PE=3 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 2.817e-65 Identity = 123/216 (56.94%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+++KS G P++TKDGV+VA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ VI +LK A+ ++TP E QV TISANGE EIG++++ AM+KVG EGVITV + EL+ V GM+ RGYISPYFVT+P+ +LENP Sbjct: 3 AKDVKFGADARQRMLRGVDILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGHKAVAAGMNPMDLKRGIDKAVAVVIEELKKNAKKVTTPAETAQVGTISANGESEIGQMISEAMQKVGSEGVITVEEAKHFQTELDVVEGMQFDRGYISPYFVTNPEKMTADLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BRAJA (60 kDa chaperonin 1 OS=Bradyrhizobium japonicum GN=groL1 PE=2 SV=3) HSP 1 Score: 248.44 bits (633), Expect = 2.817e-65 Identity = 123/216 (56.94%), Postives = 164/216 (75.93%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ F AR +L+GV +A AVKVT+GPKGRNV+IEKS G P++TKDGVTVA IE DK +++GA +V++VA T+ AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI +A++A+++DLK+ A+ ++T EEI Q+ATISANG+ EIG LA AM+KVG +GVITV + ++ ELE V GM+ RGY SPYFVT+ + + E E+P Sbjct: 3 AKEVKFSTDARDRVLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDLAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGIDLAVEAIVNDLKAHAKKVTTNEEIAQIATISANGDIEIGRFLADAMQKVGNDGVITVEEAKSLDTELEVVEGMQFDRGYASPYFVTNAEKMRVEFEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_HAEIN (60 kDa chaperonin OS=Haemophilus influenzae GN=groL PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.680e-65 Identity = 124/216 (57.41%), Postives = 165/216 (76.39%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGR+VI++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AV+S+LK+ ++ T +EI QV TISAN + +G+L+++AMEKVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T EL+NP Sbjct: 3 AKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRHVILDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVSAVVSELKNLSKPCETAKEIEQVGTISANSDSIVGQLISQAMEKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETATVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUSU (60 kDa chaperonin OS=Brucella suis GN=groL PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.680e-65 Identity = 122/215 (56.74%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |