FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACTP7 (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++K+ G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AV+ +LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + + L+ V GM+ RGY+SPYF+ P+ ELENP Sbjct: 3 AKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLDDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACTP2 (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++K+ G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AV+ +LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + + L+ V GM+ RGY+SPYF+ P+ ELENP Sbjct: 3 AKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLDDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHORT (60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL1 PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 119/216 (55.09%), Postives = 165/216 (76.39%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ F AR +L+GV +A AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE +DK +++GA ++++VA + AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+ AV+ D+K+R++ I+T +EI QV TISANG+ E+G+++ARAM+KVG EGVITV + + EL+ V GM+ RGY+SPYFVT+ + +LENP Sbjct: 3 AKDVKFSSDARDRLLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELKDKFENMGAQMLREVASKSADVAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGIDLAVAAVVKDVKTRSRKIATNDEIAQVGTISANGDEEVGKIIARAMDKVGHEGVITVEEAKGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHIL3 (60 kDa chaperonin 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL1 PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 123/215 (57.21%), Postives = 164/215 (76.28%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 +K+I FG AR ML+GV +A+AVKVT+GPKGRNVII+KS G P++TKDGV+VA IE DK +++GA +V++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+ V+ DL+++A+ IST EE+ QV TISANG++++G +A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 SKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGNKAVAAGMNPMDLKRGIDLAVADVVKDLQAKAKKISTSEEVAQVGTISANGDKQVGLDIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_METPP (60 kDa chaperonin OS=Methylibium petroleiphilum (strain PM1) GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.184e-63 Identity = 120/216 (55.56%), Postives = 165/216 (76.39%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL QAI+ EG K VAAG+N MDL+ GI A+ +++ LK +++ +T +EI QV TISAN + ++G+++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ +P+ Q L+NP Sbjct: 3 AKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVVSLVEQLKKQSKPTTTSKEIAQVGTISANSDDDVGQIIASAMDKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNPEKQSAVLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEPCP (60 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.184e-63 Identity = 121/216 (56.02%), Postives = 164/216 (75.93%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL QAI+ EG K VAAG+N MDL+ GI A+ A++++LK ++ +T +EI QV +ISAN + IG ++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ +P+ Q L+NP Sbjct: 3 AKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVHALVAELKKASKATTTSKEIAQVGSISANSDESIGTIIANAMDKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYLSPYFINNPEKQAALLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ERWAP (60 kDa chaperonin (Fragment) OS=Erwinia aphidicola GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.184e-63 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL Q+I+TEG K+VAAG+N MDL+ GI A+ A + +LK + S + I QV TISAN + +GEL+A+AMEKVGKEGVITV +G + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDQAVIAAVDELKKLSVPCSDSKAIAQVGTISANSDATVGELIAQAMEKVGKEGVITVEEGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ENTAM (60 kDa chaperonin (Fragment) OS=Enterobacter amnigenus GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.184e-63 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ENT38 (60 kDa chaperonin OS=Enterobacter sp. (strain 638) GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.184e-63 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_CAUCR (60 kDa chaperonin OS=Caulobacter crescentus GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.184e-63 Identity = 121/217 (55.76%), Postives = 161/217 (74.19%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AKD+ F AR ML+GV+ +A AVKVT+GPKGRNV+IEKS G P+ TKDGV+VA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI A+ I D+K+ ++ ++T EI QV TISANG++E+GE++A+AM+KVG EGVITV + T EL+ V GM+ RGY+SPYF+T+ + +LE PL Sbjct: 3 AKDVYFSSDARDKMLRGVNILANAVKVTLGPKGRNVVIEKSFGAPRTTKDGVSVAKEIELADKFENLGAQMIREVASKTNDKAGDGTTTATVLAQAIVQEGLKSVAAGMNPMDLKRGIDKAVAIAIEDIKTSSKKVTTNAEIAQVGTISANGDKEVGEMIAKAMDKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFITNADKMEVQLEEPL 219 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |