FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_AERHH (60 kDa chaperonin OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=groL PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61 Identity = 117/216 (54.17%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR+ ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK ++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A +++L++ +Q + I QV TISAN + ++G+L+A AM+KVG++GVITV DG + +EL V GM+ RGY+SPYFV P+T EL++P Sbjct: 3 AKEVKFGNEARSKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFMNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAAVAELQALSQPCADNNAIAQVGTISANSDEKVGKLIAEAMDKVGRDGVITVEDGQGLDDELAVVEGMQFDRGYLSPYFVNKPETGAVELDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH605_BURXL (60 kDa chaperonin 5 OS=Burkholderia xenovorans (strain LB400) GN=groL5 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61 Identity = 120/216 (55.56%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR+ +++GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA IE D+ +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A I +LK ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ D Q L+NP Sbjct: 3 AKEIIFSDVARSKLVEGVNILANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELPDRVQNIGAQLVKEVASRTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVVAAIDELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLDDELDVVEGLQFDRGYLSPYFINDQDKQVAVLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_VIBPA (60 kDa chaperonin 2 OS=Vibrio parahaemolyticus GN=groL2 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61 Identity = 117/216 (54.17%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE +DK +++GA +VKQVA N AGDGTT ATVL Q+ + EG K+VA+G+N MDL+ GI A +A + L+ ++ S E ITQV +ISAN +R IGE++A AMEKVG+ GVITV +G + NEL V GM+ RGY+SPYF+T+ + EL+NP Sbjct: 3 AKDVLFANDARQKMLKGVNLLADAVKVTLGPKGRNVVLDKSYGAPTITKDGVSVAKEIELKDKFENMGAQMVKQVASKANDEAGDGTTTATVLAQSFINEGLKAVASGMNPMDLKRGIDKATEAAVEKLREMSKPCSDKESITQVGSISANSDRAIGEIIAEAMEKVGRNGVITVEEGQGLDNELSVVEGMQFDRGYLSPYFITNQENGSVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XYLFT (60 kDa chaperonin OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 116/216 (53.70%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR+ M+ GV+ +A AVK T+GPKGR+V+++KS G+P +TKDGV+VA IE DK +++GA ++K+VA TN AGDGTT ATVL QA++ EGCK+VAAG+N MDL+ GI A+ A +++LK ++ S + I QVATISAN + IG ++A AM+KVGKEGVIT+ +G T+ NEL+ V GM+ RGY SPYF+ + ++Q EL+NP Sbjct: 3 AKEIIFSEKARSRMVHGVNLLANAVKATLGPKGRHVVLDKSFGSPIITKDGVSVAKEIELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGIDKAVIAAVTELKKISKPTSDDKAIAQVATISANSDESIGNIIAEAMKKVGKEGVITIEEGTTLENELDVVEGMQFDRGYSSPYFINNQQSQIVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XYLFA (60 kDa chaperonin OS=Xylella fastidiosa GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 116/216 (53.70%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR+ M+ GV+ +A AVK T+GPKGR+V+++KS G+P +TKDGV+VA IE DK +++GA ++K+VA TN AGDGTT ATVL QA++ EGCK+VAAG+N MDL+ GI A+ A +++LK ++ S + I QVATISAN + IG ++A AM+KVGKEGVIT+ +G T+ NEL+ V GM+ RGY SPYF+ + ++Q EL+NP Sbjct: 3 AKEIIFSEKARSRMVHGVNLLANAVKATLGPKGRHVVLDKSFGSPIITKDGVSVAKEIELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGIDKAVIAAVTELKKISKPTSDDKAIAQVATISANSDESIGNIIAEAMKKVGKEGVITIEEGTTLENELDVVEGMQFDRGYSSPYFINNQQSQIVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XYLF2 (60 kDa chaperonin OS=Xylella fastidiosa (strain M23) GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 116/216 (53.70%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR+ M+ GV+ +A AVK T+GPKGR+V+++KS G+P +TKDGV+VA IE DK +++GA ++K+VA TN AGDGTT ATVL QA++ EGCK+VAAG+N MDL+ GI A+ A +++LK ++ S + I QVATISAN + IG ++A AM+KVGKEGVIT+ +G T+ NEL+ V GM+ RGY SPYF+ + ++Q EL+NP Sbjct: 3 AKEIIFSEKARSRMVHGVNLLANAVKATLGPKGRHVVLDKSFGSPIITKDGVSVAKEIELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGIDKAVIAAVTELKKISKPTSDDKAIAQVATISANSDESIGNIIAEAMKKVGKEGVITIEEGTTLENELDVVEGMQFDRGYSSPYFINNQQSQIVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 116/216 (53.70%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A + LK + + + I QV TISAN + +G ++A AMEKVG++GVITV +G + +EL+ V GM+ RGY+SPYF+ + + ELENP Sbjct: 3 AKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEQLKELSVECNDTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQEAGSVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_TERTT (60 kDa chaperonin OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 119/216 (55.09%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML GV+ +A+AVK T+GPKGRNV+++K+ G P VTKDGV+VA IE +DK +++GA +VK+VA + AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI A+ A + +KS AQ + I QV TISAN + IG+++A AMEKVGKEGVITV +G+ + NEL+ V GM+ RGY+SPYF+T+ E E+P Sbjct: 3 AKDVKFGDDARQKMLVGVNVLADAVKTTLGPKGRNVVLDKAFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGIDKAVAAAVEFVKSSAQPCEDSKSIAQVGTISANSDSHIGDIIAEAMEKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFITNQDNMSVEHESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_NITMU (60 kDa chaperonin OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 118/216 (54.63%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ F AR M+ GV+ +A+AVKVT+GPKGRNV++E+S G+P +TKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VAAG+N MDL+ GI A+ A + +LK ++ +T +EI QV +ISAN + EIG+++A AMEKVGKEGVITV DG+ + NELE V GM+ RGY+SPYF+ + Q LE+P Sbjct: 3 AKEVKFSDSARHKMVNGVNILADAVKVTLGPKGRNVVLERSYGSPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVKEGMKYVAAGMNPMDLKRGIDKAVVATVEELKKLSKPCTTGKEIAQVGSISANSDPEIGKIIADAMEKVGKEGVITVEDGSGLQNELEVVEGMQFDRGYLSPYFINNADRQIALLESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEGPN (60 kDa chaperonin OS=Legionella pneumophila GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 120/217 (55.30%), Postives = 157/217 (72.35%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AK++ FG AR ML GV+ +A+AV+VTMGP+GRNV++EKS G P VTKDGV+VA IEF + ++GA +VK+VA T+ AGDGTT ATVL ++IL EG K+VAAG+N MDL+ GI A+ AV L++ ++ + I QV TISAN + IG ++A AMEKVGKEGVITV DGN + NEL V GM+ RGYISPYF+ + + CELE+P Sbjct: 1 MAKELRFGDDARLQMLAGVNALADAVQVTMGPRGRNVVLEKSYGAPTVTKDGVSVAKEIEFEHRFMNMGAQMVKEVASKTSDTAGDGTTTATVLARSILVEGHKAVAAGMNPMDLKRGIDKAVLAVTKKLQAMSKPCKDSKAIAQVGTISANSDEAIGAIIAEAMEKVGKEGVITVEDGNGLENELYVVEGMQFDRGYISPYFINNQQNMSCELEHP 217 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |