FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BORPD (60 kDa chaperonin OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=groL PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 115/216 (53.24%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + FG AR +++GV+ +A AVK T+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA LVK VA T+ AGDGTT ATVL QAI+ EG K VAAG N +DL+ GI A+ A +++L +++ ++T +EI QV +ISAN + IG+++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ +P Q L++P Sbjct: 3 AKQVLFGDDARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAIVQEGLKYVAAGFNPIDLKRGIDKAVSAAVAELAKQSKPVTTSKEIAQVGSISANSDESIGKIIADAMDKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYLSPYFINNPDKQVAALDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ALCBS (60 kDa chaperonin OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=groL PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 116/217 (53.46%), Postives = 158/217 (72.81%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AK+I F AR M +GV+ +A+AVKVT+GPKGRNV++EKS G P +TKDGV+VA IE DK +++GA +VK+VA N AGDGTT ATVL QA + EG KSV AG+N MDL+ GI A+ AV+ +LK + + I QV TISAN ++ +GE++A+AMEKVG+EGVITV +G ++ NEL+ V GM+ RGY+SPYF+ + + + ELE+P Sbjct: 1 MAKEILFRDEARQRMAKGVNILADAVKVTLGPKGRNVVLEKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAFVNEGLKSVTAGMNPMDLKRGIDQAVAAVVEELKKLSTPCDNTKSIEQVGTISANADKSVGEIIAQAMEKVGQEGVITVEEGQSLQNELDVVEGMQFDRGYLSPYFINNQEKMQVELEDP 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICFE (60 kDa chaperonin OS=Rickettsia felis GN=groL PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.564e-60 Identity = 118/217 (54.38%), Postives = 159/217 (73.27%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AK I G R +L+GV +A+AVKVT+GPKGRNV+IE+S G+PK+TKDGVTVA SIE +DK ++ GA L+K A + AGDGTT ATVL +A+ EG K VAAG N MDL+ G+ +A++AV+ ++K ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV + ++E V GM RGY+SPYFVT+ + ELENP Sbjct: 1 MAKLIKHGSEGREQVLKGVDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICTY (60 kDa chaperonin OS=Rickettsia typhi GN=groL PE=3 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 4.655e-60 Identity = 118/215 (54.88%), Postives = 157/215 (73.02%), Query Frame = 3 Query: 78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 K I G AR ML+G+ +A+AVKVT+GPKGRNV+IE+S G PK+TKDGVTVA SIE +DK ++ GA L+K A + AGDGTT ATVL +A+ EG K VAAG N MDL+ G+ +A++AV+ ++K ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV + ++E V GM RGY+SPYFVT+ + ELENP Sbjct: 4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGAPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKRSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEA6 (60 kDa chaperonin OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.655e-60 Identity = 116/216 (53.70%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ F AR ML GV+ +A AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AGDGTT ATVL Q+I+TEG K+VAAG+N MDL+ GI A+ A + LK+ + + + I QV TISAN + E+G+L+A AM+KVGKEGVITV +G ++ NELE V GM+ RGY+SPYF+ + + EL++P Sbjct: 3 AKEVRFSDDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGIDKAVIAAVEQLKTLSVPCADSKAIAQVGTISANSDTEVGDLIAEAMDKVGKEGVITVEEGQSLQNELEVVEGMQFDRGYLSPYFMNNQENGTVELDSP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_POLSQ (60 kDa chaperonin OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.655e-60 Identity = 117/216 (54.17%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR M++GV+ +A AVK T+GPKGRNV+IE+S G P +TKDGV+VA IE +DK +++GA +VK+VA T AGDGTT ATVL Q+I+ EG K V +G N MDL+ GI A+ A I++L ++ +T +EI QV +ISAN + IG+ +A AMEKVGKEGVITV DG ++ +ELE V GM+ RGY+SPYF+ P+ Q LE+P Sbjct: 3 AKDVVFGDSARTKMVEGVNILANAVKTTLGPKGRNVVIERSFGGPTITKDGVSVAKEIELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGIDKAVTAAIAELAKISKPCTTTKEIAQVGSISANSDHSIGQRIAEAMEKVGKEGVITVEDGKSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PELUB (60 kDa chaperonin OS=Pelagibacter ubique GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.655e-60 Identity = 115/217 (53.00%), Postives = 158/217 (72.81%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AK + F ARAAM++GV +A VKVT+GPKGRNV+I+KS G P++TKDGV+VA I+ DK +++GA +VK+VA TN+ AGDGTT AT+L QAI+ EG K V AG+N MD++ GI A++ V + L + A+ + +EI QV TISANG++EIG ++A+AM+KVG EGVITV + + EL+ V GM+ RGY+SPYF+T+ ELENP Sbjct: 1 MAKVVKFDSEARAAMIRGVDILANTVKVTLGPKGRNVVIDKSYGAPRITKDGVSVAKEIDLEDKFENMGAQMVKEVASKTNEEAGDGTTTATILAQAIVKEGVKYVTAGMNPMDVKRGIDAAVEHVKASLIASAKKVKDTDEIAQVGTISANGDKEIGNMIAKAMQKVGNEGVITVEEAKGVETELDVVEGMQFDRGYLSPYFITNADKMTTELENP 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_FRATT (60 kDa chaperonin OS=Francisella tularensis subsp. tularensis GN=groL PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.655e-60 Identity = 118/216 (54.63%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F ARA ML GV+ +A AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA T AGDGTT ATVL QA+LTEG K+VAAG+N MDL+ GI A ++ +LK+ ++ S P+ I QV TISAN + +G+L+A AM KVGKEGVITV +G +EL+ V GM+ RGY+SPYF T+ + +LENP Sbjct: 3 AKQVLFSDEARAKMLDGVNTLANAVKVTLGPKGRNVVLDKSFGTPTITKDGVSVAKEIELEDKFENMGAQIVKEVASKTADVAGDGTTTATVLAQALLTEGLKAVAAGMNPMDLKRGIDKATARLVEELKALSKPCSDPKSIEQVGTISANSDATVGKLIADAMAKVGKEGVITVEEGKGFEDELDVVEGMQFDRGYLSPYFATNQENMTTDLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_FRAT1 (60 kDa chaperonin OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.655e-60 Identity = 118/216 (54.63%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F ARA ML GV+ +A AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA T AGDGTT ATVL QA+LTEG K+VAAG+N MDL+ GI A ++ +LK+ ++ S P+ I QV TISAN + +G+L+A AM KVGKEGVITV +G +EL+ V GM+ RGY+SPYF T+ + +LENP Sbjct: 3 AKQVLFSDEARAKMLDGVNTLANAVKVTLGPKGRNVVLDKSFGTPTITKDGVSVAKEIELEDKFENMGAQIVKEVASKTADVAGDGTTTATVLAQALLTEGLKAVAAGMNPMDLKRGIDKATARLVEELKALSKPCSDPKSIEQVGTISANSDATVGKLIADAMAKVGKEGVITVEEGKGFEDELDVVEGMQFDRGYLSPYFATNQENMTTDLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_AMOPS (60 kDa chaperonin OS=Amoeba proteus symbiotic bacterium GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.655e-60 Identity = 116/217 (53.46%), Postives = 156/217 (71.89%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AK++ FG AR ML GV+ +A+ VK TMGP GRNV++E+S G P VTKDGV+VA IEF ++ K++GA +VK+VA T+ AGDGTT ATVL ++I+ EG K+VAAG+N MDL+ GI A+ A+ +L+ ++ + I QV TISAN ++ IG ++A AMEKVGKEGVITV DGN + NEL V GM+ RGYISPYF+ + + ELE+P Sbjct: 1 MAKELRFGDDARQQMLAGVNALADRVKATMGPSGRNVVLERSFGAPTVTKDGVSVAKEIEFENRFKNMGAQMVKEVAAKTSDTAGDGTTTATVLARSIVVEGHKAVAAGMNPMDLKRGIDKAVTAITKELQKMSKPCKDGKAIAQVGTISANSDQAIGSIIAEAMEKVGKEGVITVEDGNGLENELSVVEGMQFDRGYISPYFINNQQNMSAELEHP 217 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |