FC876214

Overview
NameFC876214
Unique NameFC876214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_JANMA (60 kDa chaperonin OS=Janthinobacterium sp. (strain Marseille) GN=groL PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63
Identity = 123/216 (56.94%), Postives = 161/216 (74.54%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK++ FG  ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA  IE +DK +++GA LVK+VA  T+  AGDGTT ATVL QAI+ EG K VAAG+N MDL+ GI  A+ A +  L + A+  +T +EI QV +ISAN +  IGE +A AMEKVGKEGVITV DG ++ +EL+ V GM+  RGY+SPYF+ +P+ Q   LENP
Sbjct:    3 AKEVIFGDAARAKMVEGVNVLANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASRTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVAATVEQLAAIAKPCTTTKEIAQVGSISANSDASIGERIAEAMEKVGKEGVITVEDGKSLNDELDIVEGMQFDRGYLSPYFINNPEKQTAILENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63
Identity = 124/217 (57.14%), Postives = 155/217 (71.43%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725
            AK + FG  AR  ML+GV  +A AVKVT+GPKGRNV+IEKS G P+ TKDGVTVA  IE  DK +++GA ++++VA   N  AGDGTT ATVL QAI+ EG K VAAG+N MDL+ GI  A+  V+SDL   ++ + T EEI QV TISANGE EIG+++A AM KVG EGVITV +   +  EL+ V GM+  RGYISPYF+T+P     ELE+ L
Sbjct:    3 AKHVVFGAEARERMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRSTKDGVTVAKEIELEDKFENMGAQMLREVASKANDTAGDGTTTATVLAQAIVREGMKRVAAGMNPMDLKRGISKAVAEVVSDLAHHSKKVKTNEEIAQVGTISANGETEIGQMIAEAMAKVGNEGVITVEEAKALETELDVVEGMQFDRGYISPYFITNPDKMIVELEDVL 219          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_AZOVI (60 kDa chaperonin OS=Azotobacter vinelandii GN=groL PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63
Identity = 122/217 (56.22%), Postives = 157/217 (72.35%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725
            AK++ FG  AR  ML GV+ +A+AVK T+GPKGRNV+++KS G P +TKDGV+VA  IE +DK +++GA LVK VA   N  AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI  A  A++++LKS A+  S  + I QV TISAN +  IG ++A AM KVGKEGVITV +G+ + NEL  V GM+  RGY+SPYF+  P T   EL+NPL
Sbjct:    3 AKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELKDKFENMGAQLVKDVASKANDEAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATIAIVAELKSLAKPCSDSKAIAQVGTISANSDESIGNIIAEAMNKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDNPL 219          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_PSYIN (60 kDa chaperonin 1 OS=Psychromonas ingrahamii (strain 37) GN=groL1 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63
Identity = 119/217 (54.84%), Postives = 163/217 (75.12%), Query Frame = 3
Query:   72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            ++K+I FG  +R+ ML GV+ +A+AVK+T+GPKGRNV+I+KS G P++TKDGVTVA  IE  DK +++GA +VK VA  TN AAGDGTT ATVL QAI+ +G K+VAAG+N MDL+ GI   + A +++LK  +   S  + ITQV TISAN + EIGE++A+AM+KVG +GVITV +G  +  EL+ V GM+  RGY+SPYF+T+ ++   ELENP
Sbjct:    1 MSKEIKFGNDSRSKMLNGVNILADAVKITLGPKGRNVVIDKSYGAPQITKDGVTVAKEIELEDKFENMGAQMVKDVASQTNDAAGDGTTTATVLAQAIIADGLKAVAAGMNPMDLKRGIDQTVKAAVAELKKLSTPCSDSKAITQVGTISANSDHEIGEIIAQAMQKVGNQGVITVEEGQGLETELDVVEGMQFDRGYLSPYFMTNHESGTVELENP 217          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEPU (60 kDa chaperonin OS=Pseudomonas putida GN=groL PE=1 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 1.002e-62
Identity = 123/217 (56.68%), Postives = 158/217 (72.81%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725
            AKD+ FG  AR  ML GV+ +A+AVK T+GPKGRNV++ KS G P +TKDGV+VA  IE +D  +++GA LVK+VA   N AAGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI  A  AV+++LK+ ++  +  + I QV TISAN +  IGE++A AMEKVGKEGVITV +G+ + NEL  V GM+  RGY+SPYFV  P T   ELE PL
Sbjct:    3 AKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEIELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKATAAVVAELKNLSKPCADSKAIAQVGTISANSDSSIGEIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPL 219          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_KLEP3 (60 kDa chaperonin OS=Klebsiella pneumoniae (strain 342) GN=groL PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.002e-62
Identity = 121/216 (56.02%), Postives = 159/216 (73.61%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AKD+ FG  AR  ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA  IE  DK +++GA +VK+VA   N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI  A+ A + +LK+ +   S  + I QV TISAN +  +G+L+A AM+KVGKEGVITV DG  + +EL+ V GM+  RGY+SPYF+  P T   ELE+P
Sbjct:    3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPDTGAVELESP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ENTIT (60 kDa chaperonin (Fragment) OS=Enterobacter intermedius GN=groL PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.002e-62
Identity = 120/216 (55.56%), Postives = 160/216 (74.07%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AKD+ FG  AR  ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA  IE  DK +++GA +VK+VA   N AAGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI  A+ A + +LK+ +   S  + I QV TISAN +  +G+L+A AM+KVGKEGVITV DG  + +EL+ V GM+  RGY+SPYF+  P+T   ELE+P
Sbjct:    3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIIAEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ENTAE (60 kDa chaperonin (Fragment) OS=Enterobacter aerogenes GN=groL PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.002e-62
Identity = 121/216 (56.02%), Postives = 159/216 (73.61%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AKD+ FG  AR  ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA  IE  DK +++GA +VK+VA   N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI  A+ A + +LK+ +   S  + I QV TISAN +  +G+L+A AM+KVGKEGVITV DG  + +EL+ V GM+  RGY+SPYF+  P T   ELE+P
Sbjct:    3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPDTGAVELESP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_CAUSK (60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.002e-62
Identity = 118/217 (54.38%), Postives = 161/217 (74.19%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725
            AKD+ F   AR  ML+GV+ +A AVKVT+GPKGRNV+IEKS G P+ TKDGV+VA  IE  D+ +++GA ++++VA  TN  AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI  A+  V+  +K+ ++ ++T  EI QV TISANG++++GE++A+AM+KVG EGVITV +  T   EL+ V GM+  RGY+SPYF+T+    + +LE PL
Sbjct:    3 AKDVYFSSDARDKMLRGVNILANAVKVTLGPKGRNVVIEKSFGAPRSTKDGVSVAKEIELADRFENLGAQMIREVASKTNDKAGDGTTTATVLAQAIVQEGLKSVAAGMNPMDLKRGIDKAVHVVVDSIKASSKKVTTNNEIAQVGTISANGDKDVGEMIAKAMDKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFITNADKMEVQLEEPL 219          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCRP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Rhopalosiphum padi GN=groL PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.002e-62
Identity = 120/216 (55.56%), Postives = 160/216 (74.07%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AKD+ FG  AR  ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA  IE  DK +++GA +VK+VA   N AAGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI  A+ + + +LK+ +   S  + ITQV TISAN + ++G L+A AMEKVG +GVITV +G  + NELE V GM+  RGY+SPYF+  P+T   ELENP
Sbjct:    3 AKDVKFGNEARIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELKNLSVPCSDSKAITQVGTISANADEKVGALIAEAMEKVGNDGVITVEEGTGLQNELEVVKGMQFDRGYLSPYFINKPETGVVELENP 218          
The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_JANMA7.673e-6356.9460 kDa chaperonin OS=Janthinobacterium sp. (strain... [more]
CH60_HYPNA7.673e-6357.1460 kDa chaperonin OS=Hyphomonas neptunium (strain ... [more]
CH60_AZOVI7.673e-6356.2260 kDa chaperonin OS=Azotobacter vinelandii GN=gro... [more]
CH601_PSYIN7.673e-6354.8460 kDa chaperonin 1 OS=Psychromonas ingrahamii (st... [more]
CH60_PSEPU1.002e-6256.6860 kDa chaperonin OS=Pseudomonas putida GN=groL PE... [more]
CH60_KLEP31.002e-6256.0260 kDa chaperonin OS=Klebsiella pneumoniae (strain... [more]
CH60_ENTIT1.002e-6255.5660 kDa chaperonin (Fragment) OS=Enterobacter inter... [more]
CH60_ENTAE1.002e-6256.0260 kDa chaperonin (Fragment) OS=Enterobacter aerog... [more]
CH60_CAUSK1.002e-6254.3860 kDa chaperonin OS=Caulobacter sp. (strain K31) ... [more]
CH60_BUCRP1.002e-6255.5660 kDa chaperonin OS=Buchnera aphidicola subsp. Rh... [more]

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Properties
Property NameValue
Genbank descriptionC32001G09EF DevOvary1 Citrus clementina cDNA clone C32001G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bp
GAGCCTCTTCAATCAGTTCCCCTCGCTGCAAGAAAGGGGTGTATGGTAGG
GTTTTATGCAATAGGAACTATGTGGCGAAGGATATCAATTTTGGAGTTGG
TGCACGAGCTGCCATGTTACAAGGTGTATCCGAGGTGGCAGAAGCTGTAA
AAGTTACCATGGGACCAAAGGGTCGCAATGTGATTATTGAGAAAAGTGTT
GGAAATCCCAAGGTCACAAAGGATGGTGTTACTGTTGCCAGCAGCATAGA
ATTCAGGGACAAGGCAAAAGATGTTGGTGCAAACCTTGTAAAGCAGGTTG
CCGGTGCTACTAATAAAGCTGCGGGAGATGGTACAACTTGCGCAACTGTT
CTGACTCAGGCCATTCTCACAGAAGGCTGTAAATCTGTAGCTGCTGGTCT
AAATGTGATGGATTTGCGCAGTGGTATTAAGATGGCGATCGATGCAGTCA
TATCTGATTTAAAAAGCAGAGCACAAATGATTAGTACACCGGAAGAAATT
ACACAGGTGGCGACTATCTCTGCAAATGGTGAACGGGAGATTGGGGAACT
GCTAGCAAGAGCAATGGAGAAAGTTGGAAAGGAAGGAGTCATTACTGTTG
TTGATGGAAATACTATGGTTAATGAGCTGGAAAGTGTTGGAGGAATGAAG
CTAGCCAGAGGTTACATTTCTCCTTATTTTGTTACAGATCCAAAGACACA
GAAATGTGAACTTGAAAATCCTCTG
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