FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH606_BRAJA (60 kDa chaperonin 6 OS=Bradyrhizobium japonicum GN=groL6 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 119/215 (55.35%), Postives = 163/215 (75.81%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ F V AR ML+GV +A AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA + AAGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI +A++AV++DL ++ +++ +EI QV TISANG+ EIG+ LA AM+KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E+++ Sbjct: 3 AKEVKFSVDARDKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_BRASO (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain ORS278) GN=groL3 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 119/215 (55.35%), Postives = 161/215 (74.88%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV +A AVKVT+GPKGRNV+IEKS G P++TKDGVTVA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AVI D++ RA+ +++ E+ QV TISANG+ IG+++A+AM+KVG EGVITV + ++ E++ V GMK RGY+SPYFVT+ + EL++ Sbjct: 3 AKDVKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDTAVAAVIKDIEKRAKPVASSAEVAQVGTISANGDAAIGKMIAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTAELDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURPS (60 kDa chaperonin 2 OS=Burkholderia pseudomallei GN=groL2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F GARA +++GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA IE DK +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A + +LK ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ P+ Q L+ P Sbjct: 3 AKEIIFHDGARAKLVEGVNLLANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLADELDVVEGLQFDRGYLSPYFINHPERQLAVLDEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURP6 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 668) GN=groL2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F GARA +++GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA IE DK +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A + +LK ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ P+ Q L+ P Sbjct: 3 AKEIIFHDGARAKLVEGVNLLANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLADELDVVEGLQFDRGYLSPYFINHPERQLAVLDEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURP1 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1710b) GN=groL2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F GARA +++GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA IE DK +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A + +LK ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ P+ Q L+ P Sbjct: 3 AKEIIFHDGARAKLVEGVNLLANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLADELDVVEGLQFDRGYLSPYFINHPERQLAVLDEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURP0 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1106a) GN=groL2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F GARA +++GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA IE DK +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A + +LK ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ P+ Q L+ P Sbjct: 3 AKEIIFHDGARAKLVEGVNLLANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLADELDVVEGLQFDRGYLSPYFINHPERQLAVLDEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 119/215 (55.35%), Postives = 161/215 (74.88%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV +A AVKVT+GPKGRNV+IEKS G P++TKDGVTVA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AVI D++ RA+ +++ E+ QV TISANG+ IG+++A+AM+KVG EGVITV + ++ E++ V GMK RGY+SPYFVT+ + EL++ Sbjct: 3 AKDVKFAGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDTAVAAVIKDIEKRAKPVASSAEVAQVGTISANGDAAIGKMIAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTAELDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_WIGBR (60 kDa chaperonin OS=Wigglesworthia glossinidia brevipalpis GN=groL PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.709e-62 Identity = 117/216 (54.17%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ ML+GV+ +A+AVKVT+GPKGRNV+++KS G+P +TKDGV+VA +E DK +++GA ++K+VA N AAGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI A+ +++LK + S + I QV TISAN ++ +G L+A AMEKVGKEGVITV +G+ + +EL+ V GM+ RGY+SPYFV P+ + EL+NP Sbjct: 3 AKDVKFGNDARSKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPMITKDGVSVAREVELEDKFENMGAQMLKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIGAVAELKKLSVPCSDSKSIAQVGTISANADKTVGTLIAEAMEKVGKEGVITVEEGSGLQDELDVVEGMQFDRGYLSPYFVNKPEARSVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PHOLL (60 kDa chaperonin OS=Photorhabdus luminescens subsp. laumondii GN=groL PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.709e-62 Identity = 120/216 (55.56%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL Q+I+TEG K+VAAG+N MDL+ GI A+ A +++LK + S I QV TISAN + +G+L+A AM+KVGKEGVITV +G + +EL+ V GM+ RGY+SPYF+ P+ ELENP Sbjct: 3 AKDVKFGSDARVKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGIDKAVVAAVAELKKLSVPCSDSISIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEEGTGLEDELDVVEGMQFDRGYLSPYFINKPENGSVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEIMA (Chaperonin HSP60, mitochondrial OS=Leishmania major GN=HSP60 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.709e-62 Identity = 129/235 (54.89%), Postives = 164/235 (69.79%), Query Frame = 3 Query: 21 PRCKKGVYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 PRC K YG KDI +G+ AR A+L GV + +AV VT+GPKGRNVI+E PK+TKDGVTVA SIEF D +++GANLV+QVAG TN AGDGTT ATVL+ AI EG +SVA+G N MDL+ GI +A V+ L +++ +++ EITQVA ISAN ++EIG L+ AM++VGK+GVIT +G ++ ELE V GM RGY SPYFVT+ K Q+CELEN L Sbjct: 7 PRCVK--YGST-------PKDIRYGMEARNALLAGVENLVKAVGVTLGPKGRNVILEMPYACPKITKDGVTVAKSIEFEDSFENLGANLVRQVAGLTNDNAGDGTTTATVLSGAIFKEGFRSVASGTNPMDLKRGIDLACREVLISLAEQSRPVTSKSEITQVAMISANMDQEIGSLIGDAMQQVGKDGVITTQEGRSLNTELELVEGMSFERGYTSPYFVTNTKAQRCELENAL 232 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |