FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_CHRSD (60 kDa chaperonin OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=groL PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.709e-62 Identity = 121/216 (56.02%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK I F AR M +GV+ +A+AVKVT+GPKGRNV++EKS G+P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+TEG K V AG+N MDL+ GI A+DA + +++S + + + I QV TISANG++ IGE++A AM+KVGKEGVITV +G +ELE V GM+ RGY+SPYFVT+ T ELE+P Sbjct: 3 AKQIKFSDDARKRMARGVNVLADAVKVTLGPKGRNVVLEKSFGSPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVTEGMKGVTAGMNPMDLKRGIDQAVDAAVKEIQSLSVPCTDAKAIAQVGTISANGDKRIGEIIADAMQKVGKEGVITVDEGRGFEDELEVVEGMQFDRGYLSPYFVTNQDTMMVELEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_RHOPA (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris GN=groL2 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.709e-62 Identity = 119/215 (55.35%), Postives = 163/215 (75.81%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FGV AR ML+GV +A AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA + AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++AV++DL ++ +++ +EI QV TISANG+ EIG+ LA AM+KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E ++ Sbjct: 3 AKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKDIELDDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_NITHX (60 kDa chaperonin 1 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL1 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.709e-62 Identity = 120/215 (55.81%), Postives = 162/215 (75.35%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FGV AR ML+GV + AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA + AAGDGTT ATVL AI+ EG KSVAAG+N MDL+ GI +A++AV++DL ++ +++ EEI QV TIS+NG+ EIG+ LA AM+KVG EGVITV + ++ ELE V GM+ RGYISPYFVT+ + E+E+ Sbjct: 3 AKEVKFGVDARDRMLRGVEILNNAVKVTLGPKGRNVVLDKSYGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAAAIVKEGAKSVAAGMNPMDLKRGIDLAVEAVVADLVRNSKKVTSNEEIAQVGTISSNGDTEIGKFLADAMKKVGNEGVITVEEAKSLETELEIVEGMQFDRGYISPYFVTNADKMRVEMED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RALSO (60 kDa chaperonin OS=Ralstonia solanacearum GN=groL PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 119/216 (55.09%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VAAG+N MDL+ GI A+ A + +LK ++ +T +EI QV ISAN + IG +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P+ Q +L+NP Sbjct: 3 AKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVAAGMNPMDLKRGIDKAVAAAVEELKKISKPTTTSKEIAQVGAISANSDESIGARIAEAMDKVGKEGVITVEDGKSLEDELDVVEGMQFDRGYLSPYFINNPEKQVVQLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEPG (60 kDa chaperonin OS=Pseudomonas putida (strain GB-1) GN=groL PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 123/217 (56.68%), Postives = 157/217 (72.35%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AKD+ FG AR ML GV+ +A+AVK T+GPKGRNV++ KS G P +TKDGV+VA IE +D +++GA LVK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A AV+++LK+ ++ + + I QV TISAN + IG ++A AMEKVGKEGVITV +G+ + NEL V GM+ RGY+SPYFV P T ELE PL Sbjct: 3 AKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEIELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATAAVVAELKNLSKPCADSKAIAQVGTISANSDDSIGNIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BLOPB (60 kDa chaperonin OS=Blochmannia pennsylvanicus (strain BPEN) GN=groL PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 119/216 (55.09%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N +AGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI A+ A + +LK + S P+ I QV TISAN + +G+L+A+AM+KVGKEGVITV +G+ + +EL+ V GM+ RGY+SPYFV P++ ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDSAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKKLSVPCSDPKAIAQVGTISANSDETVGKLIAQAMDKVGKEGVITVEEGSGLQDELDVVEGMQFDRGYLSPYFVNKPESGTVELEHP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BLOFL (60 kDa chaperonin OS=Blochmannia floridanus GN=groL PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 119/216 (55.09%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N +AGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI A+ A + +LK + S P+ I QV TISAN + +G+L+A+AM+KVGKEGVITV +G+ + +EL+ V GM+ RGY+SPYFV P++ ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDSAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKKLSVPCSDPKAIAQVGTISANSDETVGKLIAQAMDKVGKEGVITVEEGSGLQDELDVVEGMQFDRGYLSPYFVNKPESGTVELEHP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 119/216 (55.09%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ F V AR ML+GV +A AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA +V++VA T+ AGDGTT ATVL QAI+ EG K+V +G+N MDL+ GI +A+ A++ +LK+ A+ IS EI QV TISANG+ EIG LA A++KVG +GVITV + T ELE V GM+ RGY+SPYFVT+ + E E+P Sbjct: 3 AKEVKFSVEAREKMLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGIDLAVSAIVEELKANARKISNNAEIAQVGTISANGDAEIGRFLAEAVQKVGNDGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_BURCH (60 kDa chaperonin 3 OS=Burkholderia cenocepacia (strain HI2424) GN=groL3 PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 120/217 (55.30%), Postives = 161/217 (74.19%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AKD+ F GAR +++GV+ +A+AVKVT+GPKGRNV+IE+ G P +TKDGV+VA IE +D+ +++GA +VKQVA T AGDGTT ATVL QAI+ EG K VAAG+N MDL+ GI A+ AV+ +L+ ++ IST +EI QV ISAN + IG+++A AMEKVGK+GVITV DG ++ NEL+ V GM+ RGY+SPYF+ DP Q L++ L Sbjct: 3 AKDVKFRDGARQQIVKGVNVLADAVKVTLGPKGRNVVIERGFGAPVITKDGVSVAKEIELKDRFENMGAQIVKQVASKTADVAGDGTTTATVLAQAIVQEGMKHVAAGMNPMDLKRGIDKAVGAVLDELRKLSRPISTHKEIAQVGAISANSDEAIGKIIADAMEKVGKDGVITVEDGKSLENELDVVEGMQFDRGYVSPYFINDPAKQAAYLDDAL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_RHILE (60 kDa chaperonin 2 OS=Rhizobium leguminosarum GN=groL2 PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 120/216 (55.56%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR ML+GV +A AVK T+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA +V++VA T+ AGDGTT ATVL QAI+ EG K+V +G+N MDL+ GI +A+ A++++LK+ A+ IS EI QV TISANG+ EIG LA AMEKVG +GVITV + T ELE V GM+ RGY+SPYFVT+ + E E+P Sbjct: 3 AKEIKFSTEAREKMLRGVDILANAVKATLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGIDLAVAAIVAELKANARKISNNSEIAQVGTISANGDAEIGRFLAEAMEKVGNDGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |