FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURXL (60 kDa chaperonin 2 OS=Burkholderia xenovorans (strain LB400) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 120/217 (55.30%), Postives = 160/217 (73.73%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AKD+ F AR+ +++GV+ +A+AVKVT+GPKGRNV+IE+S G P +TKDGV+VA IE +D+ +++GA +VKQVA T AGDGTT ATVL Q+I+ EG K VAAG+N MDL+ GI A+ AV+ +L ++ I T EI QV ISAN + IG+++A AM+KVGKEGVITV DG ++ NELE V GM+ RGY+SPYF+ DP Q L++PL Sbjct: 3 AKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEIELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGIDKAVAAVLDELHRLSKPIKTSREIAQVGAISANADEAIGKIIADAMDKVGKEGVITVEDGKSLENELEVVEGMQFDRGYLSPYFINDPDKQVAHLDDPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURTA (60 kDa chaperonin 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 120/216 (55.56%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F GAR +++GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA IE DK +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A + +LK ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ +P Q L+ P Sbjct: 3 AKEIIFHDGARTKLVEGVNLLANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVEELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLADELDVVEGLQFDRGYLSPYFINNPDRQLAVLDEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_AZOSB (60 kDa chaperonin 2 OS=Azoarcus sp. (strain BH72) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 119/216 (55.09%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + FG ARA ++QGV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA LVK+VA T AGDGTT ATVL QAI+ EG K VAAG N DL+ GI A+ A++ +LK+ ++ +T +EI QV ISAN + +IG+++A+A++KVGKEGVITV DG ++ NEL+ V G++ RGY+SPYF+ +P Q EL+NP Sbjct: 3 AKQVLFGDDARAKVVQGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKEVASKTADNAGDGTTTATVLAQAIVREGFKFVAAGFNPADLKRGIDKAVAAIVDELKALSKPTTTSKEIAQVGAISANSDADIGDIIAKAIDKVGKEGVITVEDGKSLNNELDVVEGLQFDRGYLSPYFINNPDKQVAELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BURPS (60 kDa chaperonin 1 OS=Burkholderia pseudomallei GN=groL1 PE=3 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 119/216 (55.09%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A + +LK ++ +T +EI QV ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P Q LENP Sbjct: 3 AKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BURP6 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 668) GN=groL1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 119/216 (55.09%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A + +LK ++ +T +EI QV ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P Q LENP Sbjct: 3 AKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BURP1 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1710b) GN=groL1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 119/216 (55.09%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A + +LK ++ +T +EI QV ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P Q LENP Sbjct: 3 AKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BURP0 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1106a) GN=groL1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 119/216 (55.09%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A + +LK ++ +T +EI QV ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P Q LENP Sbjct: 3 AKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RHOMR (60 kDa chaperonin OS=Rhodothermus marinus GN=groL PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62 Identity = 123/215 (57.21%), Postives = 154/215 (71.63%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK I F AR A+ +GV ++A+AVKVT+GPKGRNVIIEK G P VTKDGVTVA IE DK ++VGA +VK+VA T+ AGDGTT ATVL QAILT G KSV AG N MDL+ GI A++ V+++L+ +Q + I QVATISANG++ IG+L+A A EKVGK+GVITV + LE V GM+ RGY+SPYFVT+P T + LE+ Sbjct: 3 AKQITFNADARMALKRGVDKLADAVKVTLGPKGRNVIIEKKFGAPTVTKDGVTVAKEIELEDKLENVGAQMVKEVASKTSDVAGDGTTTATVLAQAILTAGLKSVTAGANPMDLKRGIDKAVEVVVAELRKMSQEVQDKNRIAQVATISANGDKAIGQLIADAFEKVGKDGVITVEEAKGTETTLEVVEGMQFDRGYLSPYFVTNPDTMEAVLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_JANSC (60 kDa chaperonin OS=Jannaschia sp. (strain CCS1) GN=groL PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62 Identity = 119/218 (54.59%), Postives = 161/218 (73.85%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI +A+ VI++++ A+ ++ +E+ QV TISANGE EIG +A AM+KVG +GVITV + + E + V GM+ RGY+SPYFVT+P EL++ L Sbjct: 1 MAKDVRFDTDARNRMLKGVNTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKSVAAGMNPMDLKRGIDLAVTKVIAEIQGSAREVADSDEVAQVGTISANGEAEIGRQIADAMQKVGNDGVITVEENKGLETETDVVEGMQFDRGYLSPYFVTNPDKMIAELDDCL 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCRM (60 kDa chaperonin OS=Buchnera aphidicola subsp. Rhopalosiphum maidis GN=groL PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62 Identity = 120/216 (55.56%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI A+ + + +LK+ + S + ITQV TISAN + ++G L+A AMEKVG +GVITV +G + NELE V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKDEKFGNEARIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELKNLSVPCSDSKAITQVGTISANADEKVGALIAEAMEKVGNDGVITVEEGTGLQNELEVVKGMQFDRGYLSPYFINKPETGVVELENP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |