FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCCC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Cinara cedri GN=groL PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62 Identity = 119/216 (55.09%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI A+ + +LK + + + ITQV TISAN + ++G L+A AMEKVG +GVITV +G + NELE V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKDVKFGNEARIKMLHGVNVLADAVKVTLGPKGRNVVLDKSFGPPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIDAVDELKKLSVPCADSKAITQVGTISANADEKVGSLIAEAMEKVGNDGVITVEEGTGLQNELEVVKGMQFDRGYLSPYFINQPETGLVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_RHOP5 (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisA53) GN=groL2 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62 Identity = 118/215 (54.88%), Postives = 162/215 (75.35%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FGV AR ML+GV +A AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA + AAGDGTT ATVL AI+ EG K+VAAG+N MDL+ GI +A++AV++DL ++ +++ EEI QV TISANG+ EIG+ L+ AM+KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E ++ Sbjct: 3 AKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKDIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAAAIVREGAKAVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNEEIAQVGTISANGDAEIGKFLSDAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BURS3 (60 kDa chaperonin 1 OS=Burkholderia sp. (strain 383) GN=groL1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62 Identity = 121/216 (56.02%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F ARA + +GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE DK +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A + +LK ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ +P Q E+E+P Sbjct: 3 AKEIIFSDVARAKLTEGVNILANAVKVTLGPKGRNVVLERSFGAPVVTKDGVSVAKEIELADKLQNIGAQLVKEVASRTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISRPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLADELDVVEGLQFDRGYLSPYFINNPDKQIAEIESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEST (60 kDa chaperonin OS=Pseudomonas stutzeri GN=groL PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 119/217 (54.84%), Postives = 159/217 (73.27%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK++ FG AR ML GV+ +A+AVK T+GPKGRNV++EKS G P +TKDGV+VA IE +D+ +++GA LVK VA N AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A A++++LK+ A+ + + I QV TISAN + IG+++A AME+VGKEGVITV +G+ + NEL V GM+ RGY+SPYF+ P T EL++PL Sbjct: 3 AKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDRFENMGAQLVKDVASKANDEAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATIAIVAELKNLAKPCTDSKAIAQVGTISANSDSSIGDIIAEAMERVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_NEIGO (60 kDa chaperonin OS=Neisseria gonorrhoeae GN=groL PE=1 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 115/216 (53.24%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG R M+ GV+ +A AV+VT+GPKGRNV+++++ G P +TKDGVTVA IE +DK +++GA +VK+VA TN AGDGTT ATVL Q+I+ EG K+V AG+N DL+ GI A+ A++ +LK+ A+ T +EI QV +ISAN + ++G ++A AMEKVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ D + Q L+NP Sbjct: 3 AKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGIKAVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_HAEDU (60 kDa chaperonin OS=Haemophilus ducreyi GN=groL PE=3 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 117/215 (54.42%), Postives = 161/215 (74.88%), Query Frame = 3 Query: 78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 KD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++K+ G P +TKDGV+VA IE DK +++GA +VK+VA N AGDGTT ATVL Q+I++EG ++VAAG+N MDL+ GI A+ AV+ +LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + + L+ V GM+ RGY+SPYF+ P+ EL+NP Sbjct: 4 KDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDVAGDGTTTATVLAQSIVSEGLRAVAAGMNPMDLKRGIDKAVAAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLDDALDVVEGMQFDRGYLSPYFINKPEAGTVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCAT (60 kDa chaperonin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=groL PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 119/216 (55.09%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI A+ + + +LK + S + ITQV TISAN + ++G L+A AMEKVG +GVITV +G + +ELE V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKDVKFGNEARIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELKHLSVPCSDSKAITQVGTISANADEKVGSLIAEAMEKVGNDGVITVEEGTGLQDELEVVKGMQFDRGYLSPYFINKPETGIVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCAI (60 kDa chaperonin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=groL PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 119/216 (55.09%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI A+ + + +LK + S + ITQV TISAN + ++G L+A AMEKVG +GVITV +G + +ELE V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKDVKFGNEARIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELKHLSVPCSDSKAITQVGTISANADEKVGSLIAEAMEKVGNDGVITVEEGTGLQDELEVVKGMQFDRGYLSPYFINKPETGIVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCA5 (60 kDa chaperonin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=groL PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 119/216 (55.09%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI A+ + + +LK + S + ITQV TISAN + ++G L+A AMEKVG +GVITV +G + +ELE V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKDVKFGNEARIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELKHLSVPCSDSKAITQVGTISANADEKVGSLIAEAMEKVGNDGVITVEEGTGLQDELEVVKGMQFDRGYLSPYFINKPETGIVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH604_RHILO (60 kDa chaperonin 4 OS=Rhizobium loti GN=groL4 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 119/215 (55.35%), Postives = 158/215 (73.49%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGVTVA IE DK +++GA +V++VA TN AGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI +A+ V++ L A+ I T EE+ QV TISANG+ +G+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+ +LE+ Sbjct: 3 AKDVKFSRDARERMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQSIVQEGHKAVAAGMNPMDLKRGIDLAVSEVVAALGKAAKKIKTSEEVAQVGTISANGDESVGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMVADLED 217 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |