FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHOFD (60 kDa chaperonin 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=groL1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 119/216 (55.09%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++++S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL QAI+ EG K V AG+N MDL+ GI A+ A+I +LK ++ +T +EI QV +ISAN + IG+++A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P+ Q L+NP Sbjct: 3 AKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLDRSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDIAGDGTTTATVLAQAIVHEGMKYVTAGMNPMDLKRGIDKAVHALIVELKKASKATTTSKEIAQVGSISANSDEAIGKIIADAMDKVGKEGVITVEDGKSLDSELDVVEGMQFDRGYLSPYFINNPEKQAALLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_METFK (60 kDa chaperonin OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=groL PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 120/216 (55.56%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + FG ARA ++ GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA IE DK +++GA LVK+VA TN AGDGTT ATVL QAI+ EG K VAAG N DL+ GI A+ +++++K+ A+ +T +EI QV +ISAN + +IG+++A AM+KVGKEGVITV DG+ + NEL+ V GM+ RGY+SPYF+ +P+ Q LENP Sbjct: 3 AKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGSPTVTKDGVSVAKEIELSDKLENMGAQLVKEVASKTNDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGIDKAVAEIVNEIKAIAKPTTTSKEIAQVGSISANSDADIGQIIADAMDKVGKEGVITVEDGSGLQNELDVVEGMQFDRGYLSPYFINNPERQIALLENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_IDILO (60 kDa chaperonin OS=Idiomarina loihiensis GN=groL PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 117/216 (54.17%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML+GV+ +A++VKVT+GPKGRNV+++KS G+P +TKDGV+VA IE DK +++GA +VK+VA N AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI A+ A + +LK +Q + + I QVATISAN + IGE++A+AM+KVG+EGVITV +G + +EL+ V GM+ RGY+SPYF+ + ++ EL+NP Sbjct: 3 AKEVKFGNTARQKMLKGVNILADSVKVTLGPKGRNVVLDKSYGSPVITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGIDKAVIAAVEELKKISQPCADSKAIAQVATISANADHTIGEIIAQAMDKVGQEGVITVEEGQALTDELDVVEGMQFDRGYLSPYFINNQESGSVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_RHOP2 (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL2 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 118/215 (54.88%), Postives = 161/215 (74.88%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FGV AR ML+GV +A AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA + AGDGTT ATVL AI+ EG KSVAAG+N MDL+ GI +A++AV++DL ++ +++ +EI QV TISANG+ EIG+ LA AM+KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E ++ Sbjct: 3 AKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADLAGDGTTTATVLAAAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_RHIME (60 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2 PE=2 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 118/215 (54.88%), Postives = 161/215 (74.88%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ F AR ML+GV +A AV+VT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA ++++VA T+ AGDGTT ATVL QAI+ EG K+VA+G+N MDL+ GI +A++A++ +L++ A+ +S EI QVATISANG+ EIG LA AMEKVG EGVITV + T ELE V GM+ RGY+SPYF+T+ + + ELE+ Sbjct: 3 AKEVKFTSDARDRMLRGVDIMANAVRVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMLREVASRTSDIAGDGTTTATVLAQAIVREGAKAVASGMNPMDLKRGIDLAVEAIVKELRNNARKVSKNAEIAQVATISANGDAEIGRYLAEAMEKVGNEGVITVEEAKTAEIELEVVEGMEFDRGYLSPYFITNQEKMRVELED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 117/216 (54.17%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M+ GV+ +A+AVKVT+GPKGRNV++++S G P +TKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL QAI+ EG K VAAG+N MDL+ GI A+ +++ ++ A+ +T +EI QV +ISAN + +IGE++A AMEKVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ + Q L+NP Sbjct: 3 AKDVKFGDSARSKMVAGVNILADAVKVTLGPKGRNVVLDRSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVQEGMKFVAAGMNPMDLKRGIDKAVVSLVGEIAKIAKPCATSKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNQDKQIAALDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURS3 (60 kDa chaperonin 2 OS=Burkholderia sp. (strain 383) GN=groL2 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 117/216 (54.17%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A + +LK ++ +T +EI QV +ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P+ Q L+NP Sbjct: 3 AKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDTSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPEKQVAVLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BURCM (60 kDa chaperonin 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL2 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 121/216 (56.02%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR + +GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE DK +++GA LVK+VA T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI A+ A + LK+ ++ +T +EI QVATISANGE IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++ RGY+SPYF+ +P Q E+ENP Sbjct: 3 AKEIIFSDVARTKLTEGVNILANAVKVTLGPKGRNVVLERSFGAPVVTKDGVSVAKEIELADKLQNIGAQLVKEVASRTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDALKTISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLADELDVVEGLQFDRGYLSPYFINNPDKQIAEIENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 118/215 (54.88%), Postives = 161/215 (74.88%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FGV AR ML+GV +A AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA + AGDGTT ATVL AI+ EG KSVAAG+N MDL+ GI +A++AV++DL ++ +++ EEI QV TISANG+ EIG+ L+ AM+KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E ++ Sbjct: 3 AKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADLAGDGTTTATVLAAAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNEEIAQVGTISANGDAEIGKFLSDAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_BURCM (60 kDa chaperonin 1 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL1 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 117/216 (54.17%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A + +LK ++ +T +EI QV +ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P+ Q L+NP Sbjct: 3 AKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDTSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPEKQVAVLDNP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |