FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEF5 (60 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=groL PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 120/217 (55.30%), Postives = 156/217 (71.89%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK++ FG AR ML GV+ +A+AVK T+GPKGRNVIIEKS G P +TKDGV+VA IE +D+ +++GA LVK VA N AGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI A A++ +LK ++ + + I QV TISAN + IG+++A AMEKVGKEGVITV +G+ + NEL V GM+ RGY+SPYF+ P T EL+ PL Sbjct: 3 AKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEIELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKATIAIVKELKGLSKPCADSKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDGPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_NITEU (60 kDa chaperonin OS=Nitrosomonas europaea GN=groL PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 117/216 (54.17%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR A++ GV+ +A+AVKVT+GPKGRNV++E+S G P +TKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG + VAAG+N MDL+ GI+ A+ + +LK ++ ST +EI QV +ISAN + EIG ++A AM+KVGKEGVITV DG+ + NEL+ V GM+ RGY+SPYFV+ Q LE+P Sbjct: 3 AKEVRFGDSARQAVISGVNVLADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDTAGDGTTTATVLAQSIVKEGMRYVAAGMNPMDLKRGIEKAVTGAVEELKKLSKPCSTSKEIAQVGSISANSDTEIGRIIAEAMDKVGKEGVITVEDGSGLENELDVVEGMQFDRGYLSPYFVSSADKQIAALESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_NEIMB (60 kDa chaperonin OS=Neisseria meningitidis serogroup B GN=groL PE=1 SV=2) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 115/216 (53.24%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG R M+ GV+ +A AV+VT+GPKGRNV+++++ G P +TKDGVTVA IE +DK +++GA +VK+VA TN AGDGTT ATVL Q+I+ EG K V AG+N DL+ GI A+ A++ +LK+ A+ T +EI QV +ISAN + ++G ++A AMEKVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ D + Q L+NP Sbjct: 3 AKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_NEIM0 (60 kDa chaperonin OS=Neisseria meningitidis serogroup C (strain 053442) GN=groL PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 115/216 (53.24%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG R M+ GV+ +A AV+VT+GPKGRNV+++++ G P +TKDGVTVA IE +DK +++GA +VK+VA TN AGDGTT ATVL Q+I+ EG K V AG+N DL+ GI A+ A++ +LK+ A+ T +EI QV +ISAN + ++G ++A AMEKVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ D + Q L+NP Sbjct: 3 AKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCBP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=groL PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 118/216 (54.63%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT AT+L QAI+ EG K+VAAG+N MDL+ GI A+ + + +L+ + + + ITQV TISAN + ++G L+A AM+KVGK+GVITV +G + +ELE V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKDVKFGNEARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELRIMSVPCADSKAITQVGTISANADEKVGSLIADAMDKVGKDGVITVEEGTGLQDELEVVKGMQFDRGYLSPYFINKPETGIVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHOPS (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL1 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 118/215 (54.88%), Postives = 163/215 (75.81%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FGV AR M++GV +A AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA + AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++AV++DL ++ +++ EEI QV TISANG+ EIG+ L+ AM+KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E ++ Sbjct: 3 AKEVKFGVDARDRMMRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELDDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGGKAVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNEEIAQVGTISANGDVEIGKFLSDAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XANCP (60 kDa chaperonin OS=Xanthomonas campestris pv. campestris GN=groL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.447e-61 Identity = 116/216 (53.70%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKDI FG AR M++GV+ +A AVK T+GPKGRNV++EKS G P +TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ A + +LK+ ++ + + I QV TISAN + IG ++A AM+KVGKEGVITV +G+ + NEL+ V GM+ RGY+SPYF+ + ++Q +L++P Sbjct: 3 AKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVIELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XANCH (60 kDa chaperonin OS=Xanthomonas campestris pv. phaseoli GN=groL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.447e-61 Identity = 116/216 (53.70%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKDI FG AR M++GV+ +A AVK T+GPKGRNV++EKS G P +TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ A + +LK+ ++ + + I QV TISAN + IG ++A AM+KVGKEGVITV +G+ + NEL+ V GM+ RGY+SPYF+ + ++Q +L++P Sbjct: 3 AKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVVELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XANCB (60 kDa chaperonin OS=Xanthomonas campestris pv. campestris (strain B100) GN=groL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.447e-61 Identity = 116/216 (53.70%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKDI FG AR M++GV+ +A AVK T+GPKGRNV++EKS G P +TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ A + +LK+ ++ + + I QV TISAN + IG ++A AM+KVGKEGVITV +G+ + NEL+ V GM+ RGY+SPYF+ + ++Q +L++P Sbjct: 3 AKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASRTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVIELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XANC8 (60 kDa chaperonin OS=Xanthomonas campestris pv. campestris (strain 8004) GN=groL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.447e-61 Identity = 116/216 (53.70%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKDI FG AR M++GV+ +A AVK T+GPKGRNV++EKS G P +TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ A + +LK+ ++ + + I QV TISAN + IG ++A AM+KVGKEGVITV +G+ + NEL+ V GM+ RGY+SPYF+ + ++Q +L++P Sbjct: 3 AKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVIELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |