FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XANAC (60 kDa chaperonin OS=Xanthomonas axonopodis pv. citri GN=groL PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.890e-61 Identity = 116/216 (53.70%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKDI FG AR M++GV+ +A AVK T+GPKGRNV++EKS G P +TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ A + +LK+ ++ + + I QV TISAN + IG ++A AM+KVGKEGVITV +G+ + NEL+ V GM+ RGY+SPYF+ + ++Q +L++P Sbjct: 3 AKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVVELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMKKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_HAHCH (60 kDa chaperonin OS=Hahella chejuensis (strain KCTC 2396) GN=groL PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.890e-61 Identity = 119/216 (55.09%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR M+ GV+ +A+AVKVT+GPKGRNV+++KS G P VTKDGV+VA IE +DK +++GA +VK+VA TN AGDGTT ATVL QAIL EG KSVAAG+N MDL+ GI A+ A + ++K+ ++ + I QV TISAN + IG ++A AMEKVGKEGVITV +G+ + +EL+ V GM+ RGY+S YFV + + ELE+P Sbjct: 3 AKDVKFGDSARKRMVAGVNTLADAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKTNDEAGDGTTTATVLAQAILNEGLKSVAAGMNPMDLKRGIDKAVIAAVKEIKNISRPCEDSKSIAQVGTISANSDERIGNIIAEAMEKVGKEGVITVEEGSGLEDELDVVEGMQFDRGYLSAYFVNNQDSMSAELEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_DICNV (60 kDa chaperonin OS=Dichelobacter nodosus (strain VCS1703A) GN=groL PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.890e-61 Identity = 121/216 (56.02%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML+GV+ +A+AVKVT+GPKGRNVI++KS G P VTKDGV+VA IE DK +++GA LVK+VA TN AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ + L + ++ S + I QV TISAN + +G +A AMEKVGKEGVITV +G + + LE V GM+ RGY+SPYF+ + ++Q+ ELENP Sbjct: 3 AKEVRFGEDARNKMLKGVNILADAVKVTLGPKGRNVILDKSFGTPTVTKDGVSVAKEIELADKFENMGAQLVKEVASQTNDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGIDKAVAEAVKTLHAISKPCSDSKAIAQVGTISANSDETVGAKIAEAMEKVGKEGVITVEEGQGLEDSLEVVEGMQFDRGYLSPYFINNQQSQQVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BURPP (60 kDa chaperonin OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=groL PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.890e-61 Identity = 118/216 (54.63%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A I +L+ ++ +T +EI QV ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P Q L+NP Sbjct: 3 AKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVTAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDGKSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BARQU (60 kDa chaperonin OS=Bartonella quintana GN=groL PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.890e-61 Identity = 120/216 (55.56%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR +L+GV +A AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A++ V+ +L +A+ I T EI QV TISANG EIG+++A AMEKVG EGVITV + T ELE V GM+ RGY+SPYFVT+ +L++P Sbjct: 3 AKEVKFGREARERLLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMLREVASKTNDIAGDGTTTATVLGQAIVQEGVKAVAAGMNPMDLKRGIDAAVEEVVGNLFKKAKKIQTSAEIAQVGTISANGAAEIGKMIADAMEKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMVADLDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_MYXXD (60 kDa chaperonin 2 OS=Myxococcus xanthus (strain DK 1622) GN=groL2 PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.890e-61 Identity = 122/218 (55.96%), Postives = 159/218 (72.94%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +AKDI F V AR A+L+GV+ +A+AVKVT+GPKGRNV+IEKS G+P +TKDGVTVA IE +K +++GA +VK+VA T+ AGDGTT ATVL QAI EG K VAAG N MD++ GI A+ A++++LK A+ +EI QV TISANG+ IG ++A AMEKVGKEGVITV + + L+ V GM+ RGY+SPYFVTDP+ + L + L Sbjct: 1 MAKDILFDVRAREAILRGVNILADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIELENKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIFREGAKLVAAGHNPMDIKRGIDKAVGAIVAELKKLAKPTKDKKEIAQVGTISANGDETIGTIIADAMEKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTDPERMEAALNDAL 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BURP8 (60 kDa chaperonin OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=groL PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.468e-61 Identity = 118/216 (54.63%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL Q+I+ EG K VA+G+N MDL+ GI A+ A I +L+ ++ +T +EI QV ISAN + IG+ +A AM+KVGKEGVITV DG ++ +EL+ V GM+ RGY+SPYF+ +P Q L+NP Sbjct: 3 AKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAIEELRKISKPCTTNKEIAQVGAISANSDTSIGDRIAEAMDKVGKEGVITVEDGKSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCTT (60 kDa chaperonin OS=Buchnera aphidicola subsp. Tuberolachnus salignus GN=groL PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.468e-61 Identity = 118/216 (54.63%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG ARA ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++G +VK+VA N AAGDGTT ATVL Q+I+TEG K+VAAG+N MDL+ GI A+ A + +L+ + S + I QV TISAN + +G+L+A AM KVGKEGVITV +G + +EL+ V GM+ RGY+SPYF+ P++ ELENP Sbjct: 3 AKEVKFGNDARAKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGTQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELRKLSVPCSDSKAIAQVGTISANSDLTVGKLIAEAMGKVGKEGVITVEEGTGLQDELDVVEGMQFDRGYLSPYFINKPESGAVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCPP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Pterocomma populeum GN=groL PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.468e-61 Identity = 118/216 (54.63%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI A+ + + +LK+ + S + ITQV TISAN + ++G L+A AMEKVG +GVITV +G + +ELE V GM+ RGY+SPYF+ +T ELENP Sbjct: 3 AKDVKFGNEARIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELKNLSVTCSDSKAITQVGTISANADEKVGSLIAEAMEKVGNDGVITVEEGTGLQDELEVVKGMQFDRGYLSPYFINKSETGIVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_RHOPB (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL2 PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.468e-61 Identity = 118/215 (54.88%), Postives = 160/215 (74.42%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV +A AVKVT+GPKGRNV+IE+S G ++TKDGVTVA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI++A+ AVI DL RA+ +++ EI QV TIS+NG+ IG+++A+AM+KVG EGVITV + ++ E++ V GMK RGY+SPYFVT+ + E ++ Sbjct: 3 AKDVKFAGDARDRMLRGVDILANAVKVTLGPKGRNVLIERSFGAARITKDGVTVAKEIELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIEIAVAAVIKDLVKRAKPVASSAEIAQVGTISSNGDAAIGKMIAQAMQKVGNEGVITVEENKSLTTEVDIVEGMKFDRGYLSPYFVTNAEKMAVEFDD 217 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |