FC876214

Overview
NameFC876214
Unique NameFC876214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEGPL (60 kDa chaperonin OS=Legionella pneumophila (strain Lens) GN=groL PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61
Identity = 120/217 (55.30%), Postives = 157/217 (72.35%), Query Frame = 3
Query:   72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            +AK++ FG  AR  ML GV+ +A+AV+VTMGP+GRNV++EKS G P VTKDGV+VA  IEF  +  ++GA +VK+VA  T+  AGDGTT ATVL ++IL EG K+VAAG+N MDL+ GI  A+ AV   L++ ++     + I QV TISAN +  IG ++A AMEKVGKEGVITV DGN + NEL  V GM+  RGYISPYF+ + +   CELE+P
Sbjct:    1 MAKELRFGDDARLQMLAGVNALADAVQVTMGPRGRNVVLEKSYGAPTVTKDGVSVAKEIEFEHRFMNMGAQMVKEVASKTSDTAGDGTTTATVLARSILVEGHKAVAAGMNPMDLKRGIDKAVLAVTKKLQAMSKPCKDSKAIAQVGTISANSDEAIGAIIAEAMEKVGKEGVITVEDGNGLENELSVVEGMQFDRGYISPYFINNQQNMSCELEHP 217          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEGPH (60 kDa chaperonin OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=groL PE=3 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61
Identity = 120/217 (55.30%), Postives = 157/217 (72.35%), Query Frame = 3
Query:   72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            +AK++ FG  AR  ML GV+ +A+AV+VTMGP+GRNV++EKS G P VTKDGV+VA  IEF  +  ++GA +VK+VA  T+  AGDGTT ATVL ++IL EG K+VAAG+N MDL+ GI  A+ AV   L++ ++     + I QV TISAN +  IG ++A AMEKVGKEGVITV DGN + NEL  V GM+  RGYISPYF+ + +   CELE+P
Sbjct:    1 MAKELRFGDDARLQMLAGVNALADAVQVTMGPRGRNVVLEKSYGAPTVTKDGVSVAKEIEFEHRFMNMGAQMVKEVASKTSDTAGDGTTTATVLARSILVEGHKAVAAGMNPMDLKRGIDKAVLAVTKKLQAMSKPCKDSKAIAQVGTISANSDEAIGAIIAEAMEKVGKEGVITVEDGNGLENELSVVEGMQFDRGYISPYFINNQQNMSCELEHP 217          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEGPC (60 kDa chaperonin OS=Legionella pneumophila (strain Corby) GN=groL PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61
Identity = 120/217 (55.30%), Postives = 157/217 (72.35%), Query Frame = 3
Query:   72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            +AK++ FG  AR  ML GV+ +A+AV+VTMGP+GRNV++EKS G P VTKDGV+VA  IEF  +  ++GA +VK+VA  T+  AGDGTT ATVL ++IL EG K+VAAG+N MDL+ GI  A+ AV   L++ ++     + I QV TISAN +  IG ++A AMEKVGKEGVITV DGN + NEL  V GM+  RGYISPYF+ + +   CELE+P
Sbjct:    1 MAKELRFGDDARLQMLAGVNALADAVQVTMGPRGRNVVLEKSYGAPTVTKDGVSVAKEIEFEHRFMNMGAQMVKEVASKTSDTAGDGTTTATVLARSILVEGHKAVAAGMNPMDLKRGIDKAVLAVTKKLQAMSKPCKDSKAIAQVGTISANSDEAIGAIIAEAMEKVGKEGVITVEDGNGLENELSVVEGMQFDRGYISPYFINNQQNMSCELEHP 217          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEGPA (60 kDa chaperonin OS=Legionella pneumophila (strain Paris) GN=groL PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61
Identity = 120/217 (55.30%), Postives = 157/217 (72.35%), Query Frame = 3
Query:   72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            +AK++ FG  AR  ML GV+ +A+AV+VTMGP+GRNV++EKS G P VTKDGV+VA  IEF  +  ++GA +VK+VA  T+  AGDGTT ATVL ++IL EG K+VAAG+N MDL+ GI  A+ AV   L++ ++     + I QV TISAN +  IG ++A AMEKVGKEGVITV DGN + NEL  V GM+  RGYISPYF+ + +   CELE+P
Sbjct:    1 MAKELRFGDDARLQMLAGVNALADAVQVTMGPRGRNVVLEKSYGAPTVTKDGVSVAKEIEFEHRFMNMGAQMVKEVASKTSDTAGDGTTTATVLARSILVEGHKAVAAGMNPMDLKRGIDKAVLAVTKKLQAMSKPCKDSKAIAQVGTISANSDEAIGAIIAEAMEKVGKEGVITVEDGNGLENELSVVEGMQFDRGYISPYFINNQQNMSCELEHP 217          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCCM (60 kDa chaperonin OS=Buchnera aphidicola subsp. Chaetophorus leucomelas GN=groL PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61
Identity = 116/216 (53.70%), Postives = 157/216 (72.69%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AKD+ FG  ARA ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA  IE  DK +++GA +VK+VA   N  AGDGTT AT+L Q+I+ EG K+VAAG+N MDL+ GI  A+   + +LK  +   S  + ITQV TISAN +  +G L++ AM+KVG +GVITV +G  + +EL+ V GM+  RGY+SPYF+  P+T   ELENP
Sbjct:    3 AKDVKFGSEARAKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDVAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDQAVIKAVKELKKLSVPCSDSKAITQVGTISANADETVGSLISEAMDKVGNDGVITVEEGTGLEDELDVVKGMQFDRGYLSPYFINKPETGNIELENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH604_BURXL (60 kDa chaperonin 4 OS=Burkholderia xenovorans (strain LB400) GN=groL4 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61
Identity = 120/216 (55.56%), Postives = 162/216 (75.00%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK+I F   AR+ +++GV+ +A AVKVT+GPKGRNV++E+S G+P VTKDGV+VA  IE  D+ +++GA LVK+VA  T+ AAGDGTT ATVL QAI+ EG K VAAGLN +DL+ GI  A+ A I +LK  ++  +T +EI QVATISANGE  IG+ +A A+++VGKEGVITV DG ++ +EL+ V G++  RGY+SPYF+ D   Q   L+NP
Sbjct:    3 AKEIIFSDVARSRLVEGVNILANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELSDRVQNIGAQLVKEVASRTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVIAAIEELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDGKSLDDELDVVEGLQFDRGYLSPYFINDQDKQVAVLDNP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_METCA (60 kDa chaperonin 1 OS=Methylococcus capsulatus GN=groL1 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61
Identity = 117/216 (54.17%), Postives = 158/216 (73.15%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK++ F   AR  ML+GV+ +A AVKVT+GPKGRNV++EKS G P VTKDGV+VA  IE  DK +++GA +VK+VA  T+  AGDGTT ATVL Q+ILTEG K+VAAG+N MDL+ GI  A+ A + ++ + +   +    I QV TISAN +  IG+++A AM+KVGKEGVITV DG+ + N+L+ V GM+  RGY+SPYF+ + ++   ELENP
Sbjct:    3 AKEVKFSDDARTRMLRGVNILAHAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEIELSDKFENMGAQMVKEVASQTSDVAGDGTTTATVLAQSILTEGLKAVAAGMNPMDLKRGIDKAVAAAVDEIHAMSVPCTDSNAIAQVGTISANADESIGKIIAEAMDKVGKEGVITVEDGSGLENQLDIVEGMQFDRGYLSPYFINNQQSMSAELENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_XYLFM (60 kDa chaperonin OS=Xylella fastidiosa (strain M12) GN=groL PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61
Identity = 116/216 (53.70%), Postives = 161/216 (74.54%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK+I F   AR+ M+ GV+ +A AVK T+GPKGRNV+++K+ G+P +TKDGV+VA  IE  DK +++GA ++K+VA  TN  AGDGTT ATVL QA++ EGCK+VAAG+N MDL+ GI  A+ A +++LK  ++  S  + I QVATISAN +  IG ++A AM+KVGKEGVIT+ +G T+ NEL+ V GM+  RGY SPYF+ + ++Q  EL+NP
Sbjct:    3 AKEIIFSEKARSRMVYGVNLLANAVKATLGPKGRNVVLDKNFGSPIITKDGVSVAKEIELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGIDKAVIAAVTELKKISKPTSDDKAIAQVATISANSDESIGNIIAEAMKKVGKEGVITIEEGTTLENELDVVEGMQFDRGYSSPYFINNQQSQIVELDNP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_TRYCR (Chaperonin HSP60, mitochondrial OS=Trypanosoma cruzi GN=HSP60 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61
Identity = 113/217 (52.07%), Postives = 153/217 (70.51%), Query Frame = 3
Query:   69 YVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719
            +  K+I FG  AR +M +GV     AV  T+GPKGRNVIIE+S G PK+TKDGVTVA +IEF+D  +++GA LV+QV   TN  AGDGTT + VL  ++ +E  + +A G N +D++ G+  A+  ++  +  +++ +++ E I QVATISANG+ E+G L+ +AMEKVGK+GVIT  DG TM  ELE V GM + RGYISPYFVTD K QK ELE+
Sbjct:    8 FAGKEIRFGTEARQSMQKGVQRAVSAVATTLGPKGRNVIIEQSYGAPKITKDGVTVAKAIEFKDPFENMGAQLVRQVCNKTNDLAGDGTTTSAVLVASVFSESLRCIATGTNPIDMKRGMDRAVGVILQSVAEQSRKVTSTENIVQVATISANGDEELGRLIGQAMEKVGKDGVITTQDGKTMTTELEVVEGMSIDRGYISPYFVTDAKAQKAELED 224          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_NEIFL (60 kDa chaperonin OS=Neisseria flavescens GN=groL PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61
Identity = 114/216 (52.78%), Postives = 158/216 (73.15%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AKD+ FG   R  M+ GV+ +A AV+VT+GPKGRNV+++++ G P +TKDGV+VA  IE +DK +++GA +VK+VA  TN  AGDGTT ATVL Q+I+ EG K V AG+N  DL+ GI  A+ A++ +LK+ A+   T +EI QV +ISAN + ++G ++A AMEKVGKEGVITV DG ++ NEL+ V GM+  RGY+SPYF+ D + Q   L+NP
Sbjct:    3 AKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVLDRAFGGPHITKDGVSVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP 218          
The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LEGPL4.210e-6155.3060 kDa chaperonin OS=Legionella pneumophila (strai... [more]
CH60_LEGPH4.210e-6155.3060 kDa chaperonin OS=Legionella pneumophila subsp.... [more]
CH60_LEGPC4.210e-6155.3060 kDa chaperonin OS=Legionella pneumophila (strai... [more]
CH60_LEGPA4.210e-6155.3060 kDa chaperonin OS=Legionella pneumophila (strai... [more]
CH60_BUCCM4.210e-6153.7060 kDa chaperonin OS=Buchnera aphidicola subsp. Ch... [more]
CH604_BURXL4.210e-6155.5660 kDa chaperonin 4 OS=Burkholderia xenovorans (st... [more]
CH601_METCA4.210e-6154.1760 kDa chaperonin 1 OS=Methylococcus capsulatus GN... [more]
CH60_XYLFM5.499e-6153.7060 kDa chaperonin OS=Xylella fastidiosa (strain M1... [more]
CH60_TRYCR5.499e-6152.07Chaperonin HSP60, mitochondrial OS=Trypanosoma cru... [more]
CH60_NEIFL5.499e-6152.7860 kDa chaperonin OS=Neisseria flavescens GN=groL ... [more]

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Properties
Property NameValue
Genbank descriptionC32001G09EF DevOvary1 Citrus clementina cDNA clone C32001G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bp
GAGCCTCTTCAATCAGTTCCCCTCGCTGCAAGAAAGGGGTGTATGGTAGG
GTTTTATGCAATAGGAACTATGTGGCGAAGGATATCAATTTTGGAGTTGG
TGCACGAGCTGCCATGTTACAAGGTGTATCCGAGGTGGCAGAAGCTGTAA
AAGTTACCATGGGACCAAAGGGTCGCAATGTGATTATTGAGAAAAGTGTT
GGAAATCCCAAGGTCACAAAGGATGGTGTTACTGTTGCCAGCAGCATAGA
ATTCAGGGACAAGGCAAAAGATGTTGGTGCAAACCTTGTAAAGCAGGTTG
CCGGTGCTACTAATAAAGCTGCGGGAGATGGTACAACTTGCGCAACTGTT
CTGACTCAGGCCATTCTCACAGAAGGCTGTAAATCTGTAGCTGCTGGTCT
AAATGTGATGGATTTGCGCAGTGGTATTAAGATGGCGATCGATGCAGTCA
TATCTGATTTAAAAAGCAGAGCACAAATGATTAGTACACCGGAAGAAATT
ACACAGGTGGCGACTATCTCTGCAAATGGTGAACGGGAGATTGGGGAACT
GCTAGCAAGAGCAATGGAGAAAGTTGGAAAGGAAGGAGTCATTACTGTTG
TTGATGGAAATACTATGGTTAATGAGCTGGAAAGTGTTGGAGGAATGAAG
CTAGCCAGAGGTTACATTTCTCCTTATTTTGTTACAGATCCAAAGACACA
GAAATGTGAACTTGAAAATCCTCTG
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