FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_LEGMI (60 kDa chaperonin OS=Legionella micdadei GN=groL PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 119/217 (54.84%), Postives = 157/217 (72.35%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AK++ FG AR ML GV+ +A+AVK TMGP GRNV++E+S G P VTKDGV+VA IEF ++ K++GA +VK+VA T+ AGDGTT ATVL +AI+ EG K+VAAG+N MDL+ GI A+ AV L+ ++ + I QV TISAN ++ IG ++A AMEKVGKEGVITV DGN++ NEL V GM+ RGYISPYF+ + + ELE+P Sbjct: 1 MAKELRFGDDARQQMLAGVNALADAVKATMGPSGRNVVLERSFGAPTVTKDGVSVAKEIEFENRFKNMGAQMVKEVAAKTSDTAGDGTTTATVLARAIVVEGHKAVAAGMNPMDLKRGIDKAVAAVTKKLQEMSKPCKDGKAIAQVGTISANSDQAIGSIIAEAMEKVGKEGVITVEDGNSLENELAVVEGMQFDRGYISPYFINNQQNMSAELEHP 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_GEOMG (60 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 120/216 (55.56%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 +AK I F R A+L+GV+ +A+AVKVT+GPKGRNVIIEKS G+P +TKDGVTVA IE DK +++GA LVK+VA T+ AGDGTT ATVL QAI +G K VAAG N M+++ GI A++ ++++L+ ++ I +EI QV TISAN ++ IG ++A AMEKVGKEGVITV + M LE+V GM+ RGY+SPYFVTDP+ + LEN Sbjct: 1 MAKIIKFDQEGRNAILKGVNTLADAVKVTLGPKGRNVIIEKSFGSPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGSKLVAAGHNPMEIKRGIDSAVETIVAELQKISKPIKDHKEIAQVGTISANNDKTIGGIIAEAMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVTDPERMEASLEN 216
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_COLP3 (60 kDa chaperonin OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=groL PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 117/216 (54.17%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P +TKDGVTVA IE DK +++GA +VK+VA N AGDGTT ATVL QAI+ EG KS+AAG+N MDL+ GI A+ A ++ LK + ++ + I QV TISAN + +G+++A AM+KVG EGVITV +G + +EL+ V GM+ RGY+SPYF+ + ELENP Sbjct: 3 AKDVLFGNDARTKMLRGVNVLADAVKVTLGPKGRNVVIDKSFGGPTITKDGVTVAKEIELDDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSIAAGMNPMDLKRGIDKAVIAAVAALKDASTPVTDNKAIEQVGTISANSDETVGQIIATAMDKVGAEGVITVEEGQALTDELDVVEGMQFDRGYLSPYFINKQENGTVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_COLMA (60 kDa chaperonin OS=Colwellia maris GN=groL PE=3 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 118/216 (54.63%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P +TKDGVTVA IE DK +++GA +VK+VA N AGDGTT ATVL QAI+ EG KS+AAG+N MDL+ GI A+ A + LK + ++ + I QV TISAN + +G+++A AMEKVG EGVITV +G + +EL+ V GM+ RGY+SPYF+ + ELENP Sbjct: 3 AKDVLFGNDARVKMLRGVNILADAVKVTLGPKGRNVVIDKSFGGPIITKDGVTVAKEIELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSIAAGMNPMDLKRGIDKAVIAAVEALKESSTPVTDNKAIEQVGTISANSDETVGKIIATAMEKVGTEGVITVEEGQALTDELDVVEGMQFDRGYLSPYFINKQENGTVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_RHILE (60 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=groL3 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 116/216 (53.70%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR +L+GV + AVKVT+GPKGRNV+I+K+ G P++TKDGV+VA IE DK +++GA +V++VA TN AGDGTT ATVL +I EG K VAAG+N MDLR GI + + AV+ ++K+RA + + EI QV TI+ANG+ IGE++A+AM+KVG EGVITV + T EL+ V GM+ RGY+SPYFVT+ + + ELE+P Sbjct: 3 AKEIRFSNDARDRLLRGVELLNNAVKVTLGPKGRNVVIDKAYGAPRITKDGVSVAKEIELADKFENMGAQMVREVASKTNDLAGDGTTTATVLAASIFREGAKLVAAGMNPMDLRRGIDLGVTAVVKEIKARAMKVKSSSEIAQVGTIAANGDAAIGEMIAKAMDKVGNEGVITVEEARTAETELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_BRAJA (60 kDa chaperonin 3 OS=Bradyrhizobium japonicum GN=groL3 PE=1 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 115/215 (53.49%), Postives = 162/215 (75.35%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FGV AR ML+GV +A AV+VT+GPKGRNV+++KS G P++TKDGV VA IE DK +++GA +V++VA AAGDGTT ATVL AI+ EG KSVAAG+N MDL+ GI +A++AV++DL+ ++ +++ +EI QV ISANG++EIG+ LA A++KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E+++ Sbjct: 3 AKEVKFGVNARDRMLRGVDILANAVQVTLGPKGRNVVLDKSFGAPRITKDGVAVAKEIELDDKFENMGAQMVREVASKAADAAGDGTTTATVLAAAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLQKNSKKVTSNDEIAQVGAISANGDQEIGKFLADAVKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_VIBC3 (60 kDa chaperonin 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=groL2 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 115/216 (53.24%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A + +LK+ + + + I QV TISAN + +G ++A AMEKVG++GVITV +G + +EL+ V GM+ RGY+SPYF+ + ++ EL+NP Sbjct: 3 AKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_VIBCH (60 kDa chaperonin 1 OS=Vibrio cholerae GN=groL1 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 115/216 (53.24%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A + +LK+ + + + I QV TISAN + +G ++A AMEKVG++GVITV +G + +EL+ V GM+ RGY+SPYF+ + ++ EL+NP Sbjct: 3 AKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 116/216 (53.70%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ F AR +L+GV +A+AVKVT+GPKGRNV+++K+ G P++TKDGV+VA IE +DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI +A V+ L+SR++ +S E+ QV ISANG+ E+G +A AMEKVGKEGVITV + EL+ V GM+ RGY+SPYF+T+P+ EL +P Sbjct: 3 AKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEIELKDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGIDLAATKVVESLRSRSKPVSDFNEVAQVGIISANGDEEVGRRIAEAMEKVGKEGVITVEEAKGFDFELDVVEGMQFDRGYLSPYFITNPEKMVAELADP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_VIBFM (60 kDa chaperonin OS=Vibrio fischeri (strain MJ11) GN=groL PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 116/216 (53.70%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + + + I QV TISAN + +G L+A AM+KVG++GVITV +G + +EL+ V GM+ RGY+SPYFV + + +LE+P Sbjct: 3 AKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKALSVPCADTKAIAQVGTISANSDSTVGNLIAEAMDKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFVNNQEAGSVDLESP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |