FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_VIBF1 (60 kDa chaperonin OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=groL PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 116/216 (53.70%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + + + I QV TISAN + +G L+A AM+KVG++GVITV +G + +EL+ V GM+ RGY+SPYFV + + +LE+P Sbjct: 3 AKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKALSVPCADTKAIAQVGTISANSDSTVGNLIAEAMDKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFVNNQEAGSVDLESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RHOS1 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=groL PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 117/215 (54.42%), Postives = 156/215 (72.56%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A V+ +K+ A+ ++ E+ QV TISANGE +IG +A AM+KVG EGVITV + + E+E V GM+ RGY+SPYFVT+ EL++ Sbjct: 3 AKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATSKVVEAIKAAARPVNDSHEVAQVGTISANGEAQIGRFIAEAMQKVGNEGVITVEENKGLETEVEVVEGMQFDRGYLSPYFVTNADKMTAELDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RHOCA (60 kDa chaperonin OS=Rhodobacter capsulatus GN=groL PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 118/215 (54.88%), Postives = 156/215 (72.56%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ F AR ML+GV+ +A+AVKVT+GPKGRNV+IEKS G P++TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A V+ +K+ A+ + +E+ QV TISANGE +IG +A A +KVG EGVITV + M E+E V GM+ RGY+SPYFVT+P +LE+ Sbjct: 3 AKEVKFSTDARDRMLKGVNILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEIELADKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVREGMKAVAAGMNPMDLKRGIDLATTTVVEAIKAAARPVKDSDEVAQVGTISANGEAQIGRFIADASQKVGNEGVITVEENKGMDTEVEVVEGMQFDRGYLSPYFVTNPDKMIADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_GEOUR (60 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groL PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 120/216 (55.56%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 +AK I F R A L+GV+ +A+AVKVT+GPKGRNV+IEKS G P +TKDGVTVA IE DK +++GA LVK+VA T+ AGDGTT ATVL QAI +G K VAAG N M+++ GI A++ ++++LK+ ++ I +EI QV TISAN ++ IG+++A AMEKVGKEGVITV + M LE+V GM+ RGY+SPYFVTDP+ + LEN Sbjct: 1 MAKIIKFDQEGRNAFLKGVNTLADAVKVTLGPKGRNVVIEKSFGAPLITKDGVTVAKEIELDDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGIDKAVETLVAELKNISKPIKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAMETTLETVEGMQFDRGYLSPYFVTDPERMEATLEN 216
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_GEOBB (60 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groL PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 118/215 (54.88%), Postives = 159/215 (73.95%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK I F AR +L+GV+ +A+AVKVT+GPKGRNV+IEKS G P +TKDGVTVA IE DK +++GA LVK+VA T+ AGDGTT ATVL QAI +G K VAAG N M+++ G+ A++A++++LK+ ++ I +EI QV TISAN ++ IG+++A AMEKVGKEGVITV + M LE+V GM+ RGY+SPYFVTDP+ + ++N Sbjct: 3 AKIIKFDQEARNCILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGLDQAVEALVAELKNISKPIKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAMETTLETVEGMQFDRGYLSPYFVTDPERMEAAMDN 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BUCTC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Tetraneura caerulescens GN=groL PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 118/216 (54.63%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AGDGTT AT+L QAI+ EG K+VAAG+N MDL+ GI A+ +S+LK + + ITQV TISAN + +G L++ AMEKVG +GVITV +G + +ELE V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKDVKFGNEARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDVAGDGTTTATLLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVINAVSELKQLSVPCLDSKAITQVGTISANADETVGTLISEAMEKVGNDGVITVEEGTGLEDELEVVKGMQFDRGYLSPYFINKPETGIVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_TOLAT (60 kDa chaperonin OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=groL PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.225e-60 Identity = 116/216 (53.70%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL Q+I+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + + + I QV TISAN + +G+L+A AM+KVG++GVITV DG + +EL V GM+ RGY+SPYF+ T EL++P Sbjct: 3 AKDVKFGSDARIKMLEGVNVLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVLAAVEELKTLSVPCADTKAIAQVGTISANSDENVGKLIAEAMDKVGRDGVITVEDGQGLQDELAVVEGMQFDRGYLSPYFINKQDTASVELDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICAH (60 kDa chaperonin OS=Rickettsia akari (strain Hartford) GN=groL PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.225e-60 Identity = 118/215 (54.88%), Postives = 158/215 (73.49%), Query Frame = 3 Query: 78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 K I G AR ML+G+ +A+AVKVT+GPKGRNV+IE+S G+PK+TKDGVTVA SIE +DK ++ GA L+K A + AGDGTT ATVL +A+ EG K VAAG N MDL+ G+ +A++AV+ ++K ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV + ++E V GM RGY+SPYFVT+ + ELENP Sbjct: 4 KLIKHGSKAREQMLEGIDVLADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEPF (60 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf0-1) GN=groL PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.225e-60 Identity = 121/217 (55.76%), Postives = 154/217 (70.97%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK++ FG AR ML GV+ +A+AVK T+GPKGRNVI+EKS G P +TKDGV+VA IE D+ +++GA LVK VA N AGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI A AV+++LK + + + I QV TISAN + IG+++A AMEKVGKEGVITV +G+ + NEL V GM+ RGY+SPYFV P T ELE L Sbjct: 3 AKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVILEKSFGAPTITKDGVSVAKEIELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKATIAVVAELKKLSAPCTDTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGAL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEHT (60 kDa chaperonin OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=groL PE=3 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.225e-60 Identity = 118/217 (54.38%), Postives = 162/217 (74.65%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGK-EGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ F ARA ML GV+ +A AVKVT+GPKGRNV+++KS G+P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI A+ A +++LK+ + S + I QV TISAN ++EIG+++A+AMEKVG+ GVITV +G ++ NEL+ V GM+ RGY+SPYF+ P+ EL+NP Sbjct: 3 AKEVLFAGDARAKMLTGVNILANAVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKALSVPCSDTKAIAQVGTISANSDKEIGDIIAQAMEKVGRNSGVITVEEGQSLENELDVVEGMQFDRGYLSPYFINSPEKGTVELDNP 219 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |