FC876214

Overview
NameFC876214
Unique NameFC876214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICRI (60 kDa chaperonin (Fragment) OS=Rickettsia rickettsii GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 118/215 (54.88%), Postives = 158/215 (73.49%), Query Frame = 3
Query:   78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            K I  G  AR  ML+G+  +A+AVKVT+GPKGRNV+IE+S G+PK+TKDGVTVA SIE +DK ++ GA L+K  A    + AGDGTT ATVL +A+  EG K VAAG N MDL+ G+ +A++AV+ ++K  ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV +      ++E V GM   RGY+SPYFVT+ +    ELENP
Sbjct:    4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICPU (60 kDa chaperonin OS=Rickettsia peacockii (strain Rustic) GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 118/215 (54.88%), Postives = 158/215 (73.49%), Query Frame = 3
Query:   78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            K I  G  AR  ML+G+  +A+AVKVT+GPKGRNV+IE+S G+PK+TKDGVTVA SIE +DK ++ GA L+K  A    + AGDGTT ATVL +A+  EG K VAAG N MDL+ G+ +A++AV+ ++K  ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV +      ++E V GM   RGY+SPYFVT+ +    ELENP
Sbjct:    4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICCN (60 kDa chaperonin OS=Rickettsia conorii GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 118/215 (54.88%), Postives = 158/215 (73.49%), Query Frame = 3
Query:   78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            K I  G  AR  ML+G+  +A+AVKVT+GPKGRNV+IE+S G+PK+TKDGVTVA SIE +DK ++ GA L+K  A    + AGDGTT ATVL +A+  EG K VAAG N MDL+ G+ +A++AV+ ++K  ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV +      ++E V GM   RGY+SPYFVT+ +    ELENP
Sbjct:    4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICAE (60 kDa chaperonin OS=Rickettsia africae (strain ESF-5) GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 118/215 (54.88%), Postives = 158/215 (73.49%), Query Frame = 3
Query:   78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            K I  G  AR  ML+G+  +A+AVKVT+GPKGRNV+IE+S G+PK+TKDGVTVA SIE +DK ++ GA L+K  A    + AGDGTT ATVL +A+  EG K VAAG N MDL+ G+ +A++AV+ ++K  ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV +      ++E V GM   RGY+SPYFVT+ +    ELENP
Sbjct:    4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RHOS5 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 117/215 (54.42%), Postives = 156/215 (72.56%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719
            AKD+ F   AR  ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA  IE  DK +++GA +VK+VA  TN  AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A   V+  +K+ ++ ++   E+ QV TISANGE +IG  +A AM+KVG EGVITV +   +  E+E V GM+  RGY+SPYFVT+      ELE+
Sbjct:    3 AKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATAKVVESIKAASRPVNDQHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLETEVEVVEGMQFDRGYLSPYFVTNADKMTAELED 217          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RHOPA (60 kDa chaperonin OS=Rhodopseudomonas palustris GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 117/215 (54.42%), Postives = 156/215 (72.56%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719
            AKD+ F   AR  ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA  IE  DK +++GA +VK+VA  TN  AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A   V+  +K+ ++ ++   E+ QV TISANGE +IG  +A AM+KVG EGVITV +   +  E+E V GM+  RGY+SPYFVT+      ELE+
Sbjct:    3 AKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATAKVVESIKAASRPVNDQHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLETEVEVVEGMQFDRGYLSPYFVTNADKMTAELED 217          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_MARMS (60 kDa chaperonin OS=Marinomonas sp. (strain MWYL1) GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 119/216 (55.09%), Postives = 155/216 (71.76%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK++ FG  AR  ML+GV+ +A+AVKVT+GPKGRNVIIEKS G P VTKDGVTVA  IE  +K +++GA +VK+VA   N  AGDGTT ATVL QAI+ EG K+VAAG N MDL+ GI  A  AV+ ++ +++   +    I QV TISAN +  +G ++A AME+VGKEGVITV +G+   +EL  V GM+  RGY+SPYF+ + +T   ELENP
Sbjct:    3 AKEVKFGDSARQQMLKGVNVLADAVKVTLGPKGRNVIIEKSYGAPLVTKDGVTVAKEIELENKFENMGAQMVKEVASQANDVAGDGTTTATVLAQAIVAEGLKAVAAGRNPMDLKRGIDQAAAAVVKEIAAQSTPCTDTRAIEQVGTISANSDSSVGRIIAEAMERVGKEGVITVEEGSGFEDELAVVEGMQFDRGYLSPYFINNQETMSAELENP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_AERSA (60 kDa chaperonin OS=Aeromonas salmonicida GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 117/216 (54.17%), Postives = 159/216 (73.61%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK++ FG  AR  ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA  IE  DK +++GA +VK+VA   N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI  A+ A +++L+  +Q  +    I QV TISAN + ++G L+A AM+KVG++GVITV DG  + +EL  V GM+  RGY+SPYFV  P+T   EL++P
Sbjct:    3 AKEVKFGNEARIKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVAELQVLSQPCADNNAIAQVGTISANSDEKVGRLIAEAMDKVGRDGVITVEDGQGLDDELAVVEGMQFDRGYLSPYFVNKPETGAVELDDP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_AERS4 (60 kDa chaperonin OS=Aeromonas salmonicida (strain A449) GN=groL PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 117/216 (54.17%), Postives = 159/216 (73.61%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK++ FG  AR  ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA  IE  DK +++GA +VK+VA   N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI  A+ A +++L+  +Q  +    I QV TISAN + ++G L+A AM+KVG++GVITV DG  + +EL  V GM+  RGY+SPYFV  P+T   EL++P
Sbjct:    3 AKEVKFGNEARIKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVAELQVLSQPCADNNAIAQVGTISANSDEKVGRLIAEAMDKVGRDGVITVEDGQGLDDELAVVEGMQFDRGYLSPYFVNKPETGAVELDDP 218          
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_RHIEC (60 kDa chaperonin 3 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL3 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 114/216 (52.78%), Postives = 158/216 (73.15%), Query Frame = 3
Query:   75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722
            AK+I F   ARA +L+GV  +  AVKVT+GPKGRNV+I+K+ G P++TKDGVTVA  IE  +K +++GA +V++VA  TN  AGDGTT ATVL  +I  EG K VAAG+N MDLR GI + + A++ ++++RA+ + +  EI QV  I+ANG+  +GE++A+AMEKVG EGVITV +  T   EL+ V GM+  RGY+SPYFVT+ +  + ELE+P
Sbjct:    3 AKEIKFSTDARAHLLRGVELLNNAVKVTLGPKGRNVVIDKAYGAPRITKDGVTVAREIELGNKFENMGAQMVREVASKTNDLAGDGTTTATVLAASIFREGAKLVAAGMNPMDLRRGIDLGVSAIVKEIQARARKVKSSGEIAQVGAIAANGDATVGEMIAKAMEKVGNEGVITVEEARTAETELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDP 218          
The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_RICRI1.600e-6054.8860 kDa chaperonin (Fragment) OS=Rickettsia rickett... [more]
CH60_RICPU1.600e-6054.8860 kDa chaperonin OS=Rickettsia peacockii (strain ... [more]
CH60_RICCN1.600e-6054.8860 kDa chaperonin OS=Rickettsia conorii GN=groL PE... [more]
CH60_RICAE1.600e-6054.8860 kDa chaperonin OS=Rickettsia africae (strain ES... [more]
CH60_RHOS51.600e-6054.4260 kDa chaperonin OS=Rhodobacter sphaeroides (stra... [more]
CH60_RHOPA1.600e-6054.4260 kDa chaperonin OS=Rhodopseudomonas palustris GN... [more]
CH60_MARMS1.600e-6055.0960 kDa chaperonin OS=Marinomonas sp. (strain MWYL1... [more]
CH60_AERSA1.600e-6054.1760 kDa chaperonin OS=Aeromonas salmonicida GN=groL... [more]
CH60_AERS41.600e-6054.1760 kDa chaperonin OS=Aeromonas salmonicida (strain... [more]
CH603_RHIEC1.600e-6052.7860 kDa chaperonin 3 OS=Rhizobium etli (strain CFN ... [more]

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Properties
Property NameValue
Genbank descriptionC32001G09EF DevOvary1 Citrus clementina cDNA clone C32001G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bp
GAGCCTCTTCAATCAGTTCCCCTCGCTGCAAGAAAGGGGTGTATGGTAGG
GTTTTATGCAATAGGAACTATGTGGCGAAGGATATCAATTTTGGAGTTGG
TGCACGAGCTGCCATGTTACAAGGTGTATCCGAGGTGGCAGAAGCTGTAA
AAGTTACCATGGGACCAAAGGGTCGCAATGTGATTATTGAGAAAAGTGTT
GGAAATCCCAAGGTCACAAAGGATGGTGTTACTGTTGCCAGCAGCATAGA
ATTCAGGGACAAGGCAAAAGATGTTGGTGCAAACCTTGTAAAGCAGGTTG
CCGGTGCTACTAATAAAGCTGCGGGAGATGGTACAACTTGCGCAACTGTT
CTGACTCAGGCCATTCTCACAGAAGGCTGTAAATCTGTAGCTGCTGGTCT
AAATGTGATGGATTTGCGCAGTGGTATTAAGATGGCGATCGATGCAGTCA
TATCTGATTTAAAAAGCAGAGCACAAATGATTAGTACACCGGAAGAAATT
ACACAGGTGGCGACTATCTCTGCAAATGGTGAACGGGAGATTGGGGAACT
GCTAGCAAGAGCAATGGAGAAAGTTGGAAAGGAAGGAGTCATTACTGTTG
TTGATGGAAATACTATGGTTAATGAGCTGGAAAGTGTTGGAGGAATGAAG
CTAGCCAGAGGTTACATTTCTCCTTATTTTGTTACAGATCCAAAGACACA
GAAATGTGAACTTGAAAATCCTCTG
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