FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_ROSDO (60 kDa chaperonin 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL2 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 119/215 (55.35%), Postives = 156/215 (72.56%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P++TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI +A V++ +K A+ +S E+ QV TISANGE EIG+ +A AM+KVG EGVITV + + E + V GM+ RGY+SPYFVT+ ELE+ Sbjct: 3 AKDVKFDTDARNRMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGLKSVAAGMNPMDLKRGIDLATVKVVAAIKDAAREVSDSAEVAQVGTISANGEAEIGQQIADAMQKVGNEGVITVEENKGLETETDVVEGMQFDRGYLSPYFVTNADKMTTELED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHOSH (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides GN=groL1 PE=1 SV=4) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 117/215 (54.42%), Postives = 156/215 (72.56%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A V+ +K+ A+ ++ E+ QV TISANGE +IG +A AM+KVG EGVITV + + E+E V GM+ RGY+SPYFVT+ EL++ Sbjct: 3 AKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATSKVVEAIKAAARPVNDSHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLETEVEVVEGMQFDRGYLSPYFVTNADKMTAELDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHOS4 (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=groL1 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 117/215 (54.42%), Postives = 156/215 (72.56%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA +VK+VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A V+ +K+ A+ ++ E+ QV TISANGE +IG +A AM+KVG EGVITV + + E+E V GM+ RGY+SPYFVT+ EL++ Sbjct: 3 AKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATSKVVEAIKAAARPVNDSHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLETEVEVVEGMQFDRGYLSPYFVTNADKMTAELDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_RHILO (60 kDa chaperonin 1 OS=Rhizobium loti GN=groL1 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 116/216 (53.70%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F AR ML+GV + AVKVT+GPKGRNVII+K+ G P++TKDGVTVA IE DK +++GA +V++VA TN AGDGTT ATVL +IL EG K VAAG+N MDL+ GI A+ AV+ ++K++A+ + + EI QV TI+ANG+ +G ++A+AM+KVG +GVITV + T EL+ V GM+ RGY+SPYFVT+ + ELE P Sbjct: 3 AKEIKFATDARDRMLRGVEILTNAVKVTLGPKGRNVIIDKAYGAPRITKDGVTVAKEIELADKFENMGAQMVREVASKTNDLAGDGTTTATVLAASILREGAKLVAAGMNPMDLKRGIDQAVAAVVVEIKAKAKKVKSSAEIAQVGTIAANGDATVGAMIAKAMDKVGNDGVITVEEAKTAETELDVVEGMQFDRGYLSPYFVTNADKMRVELEEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICPR (60 kDa chaperonin OS=Rickettsia prowazekii GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 119/215 (55.35%), Postives = 157/215 (73.02%), Query Frame = 3 Query: 78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 K I G AR ML+G+ +A+AVKVT+GPKGRNV+IE+S G PK+TKDGVTVA SIE +DK K+ GA L+K A + AGDGTT ATVL +A+ EG K VAAG N MDL+ G+ +A++AV+ ++K ++ I++ EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV + ++E V GM RGY+SPYFVT+ + ELENP Sbjct: 4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGAPKITKDGVTVAKSIELKDKIKNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKRSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSEU2 (60 kDa chaperonin OS=Pseudomonas syringae pv. syringae (strain B728a) GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/217 (54.38%), Postives = 156/217 (71.89%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK++ FG R ML GV+ +A+AVK T+GPKGRNVIIEKS G P +TKDGV+VA IE +D+ +++GA LVK VA N AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A A++++LK ++ + + I QV TISAN + IG+++A AMEKV K+GVITV +G+ + NEL V GM+ RGY+SPYF+ P T EL++PL Sbjct: 3 AKEVKFGDSGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEIELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATIAIVAELKKLSKPCTDTKAIAQVGTISANSDHSIGDIIAEAMEKVTKDGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSESM (60 kDa chaperonin OS=Pseudomonas syringae pv. tomato GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/217 (54.38%), Postives = 156/217 (71.89%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK++ FG R ML GV+ +A+AVK T+GPKGRNVIIEKS G P +TKDGV+VA IE +D+ +++GA LVK VA N AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A A++++LK ++ + + I QV TISAN + IG+++A AMEKV K+GVITV +G+ + NEL V GM+ RGY+SPYF+ P T EL++PL Sbjct: 3 AKEVKFGDAGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEIELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATIAIVAELKKLSKPCTDTKAIAQVGTISANSDHSIGDIIAEAMEKVTKDGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSE14 (60 kDa chaperonin OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/217 (54.38%), Postives = 156/217 (71.89%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK++ FG R ML GV+ +A+AVK T+GPKGRNVIIEKS G P +TKDGV+VA IE +D+ +++GA LVK VA N AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A A++++LK ++ + + I QV TISAN + IG+++A AMEKV K+GVITV +G+ + NEL V GM+ RGY+SPYF+ P T EL++PL Sbjct: 3 AKEVKFGDSGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEIELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATIAIVAELKKLSKPCTDTKAIAQVGTISANSDHSIGDIIAEAMEKVTKDGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIBY (60 kDa chaperonin OS=Acinetobacter baumannii (strain AYE) GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M+ GV+ +A+AVKVT+GPKGRNV+I++S G P +TKDGVTVA I +DK +++GA LV++V+ TN AGDGTT ATVL QAIL EG KSV AG+N MDL+ GI +A+ V+ +++S A+ + I QV +ISAN + +G+L+A+AMEKVGKEGVITV +G+ + L+ V GM+ RGYISPYF T ELENP Sbjct: 3 AKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIBT (60 kDa chaperonin OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=groL PE=3 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M+ GV+ +A+AVKVT+GPKGRNV+I++S G P +TKDGVTVA I +DK +++GA LV++V+ TN AGDGTT ATVL QAIL EG KSV AG+N MDL+ GI +A+ V+ +++S A+ + I QV +ISAN + +G+L+A+AMEKVGKEGVITV +G+ + L+ V GM+ RGYISPYF T ELENP Sbjct: 3 AKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |