FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIBS (60 kDa chaperonin OS=Acinetobacter baumannii (strain SDF) GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M+ GV+ +A+AVKVT+GPKGRNV+I++S G P +TKDGVTVA I +DK +++GA LV++V+ TN AGDGTT ATVL QAIL EG KSV AG+N MDL+ GI +A+ V+ +++S A+ + I QV +ISAN + +G+L+A+AMEKVGKEGVITV +G+ + L+ V GM+ RGYISPYF T ELENP Sbjct: 3 AKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIBC (60 kDa chaperonin OS=Acinetobacter baumannii (strain ACICU) GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M+ GV+ +A+AVKVT+GPKGRNV+I++S G P +TKDGVTVA I +DK +++GA LV++V+ TN AGDGTT ATVL QAIL EG KSV AG+N MDL+ GI +A+ V+ +++S A+ + I QV +ISAN + +G+L+A+AMEKVGKEGVITV +G+ + L+ V GM+ RGYISPYF T ELENP Sbjct: 3 AKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIB5 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB0057) GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M+ GV+ +A+AVKVT+GPKGRNV+I++S G P +TKDGVTVA I +DK +++GA LV++V+ TN AGDGTT ATVL QAIL EG KSV AG+N MDL+ GI +A+ V+ +++S A+ + I QV +ISAN + +G+L+A+AMEKVGKEGVITV +G+ + L+ V GM+ RGYISPYF T ELENP Sbjct: 3 AKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIB3 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB307-0294) GN=groL PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR+ M+ GV+ +A+AVKVT+GPKGRNV+I++S G P +TKDGVTVA I +DK +++GA LV++V+ TN AGDGTT ATVL QAIL EG KSV AG+N MDL+ GI +A+ V+ +++S A+ + I QV +ISAN + +G+L+A+AMEKVGKEGVITV +G+ + L+ V GM+ RGYISPYF T ELENP Sbjct: 3 AKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_RHILO (60 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 117/215 (54.42%), Postives = 155/215 (72.09%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+I+KS G P++TKDGVTVA IE DK +++GA +V++VA TN AGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI +A+ V+ L A I T EE+ QV TI+ NG+ +G+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+ +LE+ Sbjct: 3 AKDVKFSRDARERMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQSIVQEGHKAVAAGMNPMDLKRGIDLAVSDVVWTLIKNATKIKTSEEVAQVGTIAGNGDESVGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_MAGSM (60 kDa chaperonin OS=Magnetococcus sp. (strain MC-1) GN=groL PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 114/217 (52.53%), Postives = 160/217 (73.73%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK++ FG ARA ML GV+ +A AVKVT+GPKGRNV+++KS G P++TKDGV+VA IE DK +++GA +V++V+ T AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++AV+ LK ++ ++ +EI QV ISAN ++ +G+++A AM+KVGKEGVITV + + L+ V GM+ RGY+SPYFVT+ ++ENPL Sbjct: 3 AKEVKFGEAARAKMLNGVNILANAVKVTLGPKGRNVVLDKSWGAPRMTKDGVSVAKEIELEDKFENMGAQMVREVSSKTADVAGDGTTTATVLAQAIIREGMKAVAAGMNPMDLKRGIDLAVEAVVVGLKGISREVANSQEIAQVGAISANSDKVVGDMIAEAMDKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTNADKMLVQMENPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_KLEPN (60 kDa chaperonin OS=Klebsiella pneumoniae GN=groL PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 119/216 (55.09%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A ++KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVLAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAE-VDKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPDTGAVELESP 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 120/217 (55.30%), Postives = 156/217 (71.89%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK+++F V ARAA+ +GV ++AEAVKVT+GPKGRNV+I+K G P VTKDGVTVA IE D +++GA +VK+VA T+ AGDGTT ATVL QAI EG K+V AG N M L+ GI+ A+ ++ +LK + + +EI QV TISAN + EIG L+A AMEKVGK+GVITV + + LE+V GM+ RGY+SPYFVTDP+ + LEN L Sbjct: 3 AKELHFNVDARAALKRGVDQLAEAVKVTLGPKGRNVVIDKKFGAPTVTKDGVTVAKEIELADPIENMGAQMVKEVATKTSDLAGDGTTTATVLAQAIFREGLKNVTAGSNPMALKRGIEKAVAGIVEELKRISVPTTGKKEIAQVGTISANNDPEIGNLIAEAMEKVGKDGVITVEEAKGLETTLETVDGMQFDRGYLSPYFVTDPEKMEAVLENAL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_FLAPJ (60 kDa chaperonin OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=groL PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 121/218 (55.50%), Postives = 158/218 (72.48%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMI-STPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AK+I F + AR + +GV +A AVKVT+GPKGRNVII KS G P VTKDGVTVA IE +D +++GA +VK+VA TN AGDGTT ATVL QAI+ EG K+VAAG N MDL+ GI A++A+++DL +A+++ S E+I Q+A+ISAN + IGEL+A A KVGKEGVITV + ++ V GM+ RGY+SPYFVT+P+ ELENP Sbjct: 1 MAKNIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVTVAKEIELQDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGIDKAVEAIVADLTKQAKVVGSDSEKIKQIASISANNDEVIGELIANAFAKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYLSPYFVTNPEKMDAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_DESPS (60 kDa chaperonin OS=Desulfotalea psychrophila GN=groL PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.729e-60 Identity = 118/215 (54.88%), Postives = 158/215 (73.49%), Query Frame = 3 Query: 78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 KDI +GV AR ++L GV+ +A AVKVT+GPKGRNV+IEKS G P +TKDGV+VA IE +DK +++GA +VK+VA T+ AGDGTT ATVL QAI TEG K VAAG N M+++ GI ++AVI++L++ A +EI QV TISAN + IG ++A AM+KVGKEGVITV + +M L+ V GM+ RGY+SPYFVTDP+ + +++P Sbjct: 4 KDIKYGVKARESVLIGVNTLANAVKVTLGPKGRNVLIEKSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIYTEGVKLVAAGGNPMEIKRGIDKGVEAVIAELRNIATPTKEQKEIAQVGTISANSDETIGNIIAEAMDKVGKEGVITVEEAKSMETTLDVVEGMQFDRGYLSPYFVTDPERMEVIMDDP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |