FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BORA1 (60 kDa chaperonin OS=Bordetella avium (strain 197N) GN=groL PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.940e-60 Identity = 115/216 (53.24%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR +++GV+ +A AVK T+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA LVK VA T+ AGDGTT ATVL QAI+ EG K VAAG N +DL+ GI A+ A + +LK ++ ++T +EI QV +ISAN + IG+++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ +P+ Q L++P Sbjct: 3 AKQVLFADDARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAIVQEGLKYVAAGFNPIDLKRGIDKAVAAAVVELKKASKPVTTSKEIAQVGSISANSDSSIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINNPEKQVAALDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIF5 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=groL PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.940e-60 Identity = 115/216 (53.24%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA + AGDGTT ATVL QAI+ EG K+V AG+N MDL+ GI ++ V+ +LK +++ T +E+ QV TISAN + IG+++A AMEKVG EGVITV +G+ + NEL+ V GM+ RGY+SPYFV + ELENP Sbjct: 3 AKQVAFAEHAREKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASQASDEAGDGTTTATVLAQAIIREGLKAVIAGMNPMDLKRGIDKSVIVVVEELKKQSKPCKTQKEVAQVGTISANSDDSIGKIIAEAMEKVGNEGVITVEEGSGLANELDVVEGMQFDRGYLSPYFVNNQDKMVAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACIF2 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=groL PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.940e-60 Identity = 115/216 (53.24%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA + AGDGTT ATVL QAI+ EG K+V AG+N MDL+ GI ++ V+ +LK +++ T +E+ QV TISAN + IG+++A AMEKVG EGVITV +G+ + NEL+ V GM+ RGY+SPYFV + ELENP Sbjct: 3 AKQVAFAEHAREKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASQASDEAGDGTTTATVLAQAIIREGLKAVIAGMNPMDLKRGIDKSVIVVVEELKKQSKPCKTQKEVAQVGTISANSDDSIGKIIAEAMEKVGNEGVITVEEGSGLANELDVVEGMQFDRGYLSPYFVNNQDKMVAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_VIBCH (60 kDa chaperonin 2 OS=Vibrio cholerae GN=groL2 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.940e-60 Identity = 117/216 (54.17%), Postives = 150/216 (69.44%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR ML GV+ +A AVKVT+GPKGR+V++ KS G P +TKDGV+VA IE DK +++GA ++KQVA N AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ A + L A+ S + ITQV ISAN + IGE++A+AMEKVG+ GVITV +G + NEL V GM+ RGY+SPYF+ PK ELENP Sbjct: 3 AKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEIELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGIDKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEGQALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_SORC5 (60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.940e-60 Identity = 118/215 (54.88%), Postives = 156/215 (72.56%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK+I + AR+ +L GV+ +A+AVKVT+GPKGRNV+IEKS G+P VTKDGVTVA IE ++ +++GA +V++VA T+ AGDGTT ATVL QAI EG K VAAG N M+++ GI A++A++ L+ A+ +EI QV TISANG+ IG+LLA AMEKVGKEGVITV + + L+ V GM+ RGY+SPYFVTDP+ K LE+ Sbjct: 3 AKEIIYNESARSMILAGVNALADAVKVTLGPKGRNVVIEKSFGSPTVTKDGVTVAKEIELENRFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIYREGSKLVAAGHNPMEIKRGIDKAVEAIVEHLRGSAKQTKDAKEIAQVGTISANGDETIGKLLADAMEKVGKEGVITVEEAKSADTTLDVVEGMQFDRGYLSPYFVTDPEAMKANLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_VIBC3 (60 kDa chaperonin 1 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=groL1 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.940e-60 Identity = 117/216 (54.17%), Postives = 150/216 (69.44%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR ML GV+ +A AVKVT+GPKGR+V++ KS G P +TKDGV+VA IE DK +++GA ++KQVA N AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ A + L A+ S + ITQV ISAN + IGE++A+AMEKVG+ GVITV +G + NEL V GM+ RGY+SPYF+ PK ELENP Sbjct: 3 AKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEIELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGIDKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEGQALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PSYWF (60 kDa chaperonin OS=Psychrobacter sp. (strain PRwf-1) GN=groL PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.037e-59 Identity = 117/217 (53.92%), Postives = 154/217 (70.97%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 +AKD+ FG+ AR M+ GV+ +A AVKVT+GPKGRNV+I+KS G P +TKDGV+VA IE +K +++GA LV++VA TN AGDGTT ATVL QAIL EG KSVAAG+N MDL+ GI A+ A + ++ + + + I QV +ISAN + +IGEL+A AM+KVGK+GVITV +G+ + LE V GM+ RGYISPYF + E ENP Sbjct: 1 MAKDVKFGIDARKQMMDGVNVLANAVKVTLGPKGRNVVIDKSFGAPAITKDGVSVAKEIELENKFENMGAQLVREVASKTNDVAGDGTTTATVLAQAILVEGMKSVAAGMNPMDLKRGIDKAVAAAVEEIHNISTPADDSKAIAQVGSISANSDTKIGELIAEAMDKVGKKGVITVEEGSGFEDSLEVVEGMQFDRGYISPYFANKQDSLTAEFENP 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_POLNS (60 kDa chaperonin OS=Polynucleobacter necessarius (strain STIR1) GN=groL PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.037e-59 Identity = 116/216 (53.70%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR M++GV+ +A AVK T+GPKGRNV+IE+S G P +TKDGV+VA IE +DK +++GA +VK+VA T AGDGTT ATVL Q+I+ EG K V +G N +DL+ GI A+ A I +L ++ +T +EI QV +ISAN ++ IG+ +A AMEKVGKEGVITV DG ++ +ELE V GM+ RGY+SPYF+ P+ Q LE+P Sbjct: 3 AKDVVFGDSARTKMVEGVNILANAVKTTLGPKGRNVVIERSFGGPIITKDGVSVAKEIELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGYNPLDLKRGIDKAVTAAIEELAKISKPCTTTKEIAQVGSISANSDQSIGQRIAEAMEKVGKEGVITVEDGKSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.037e-59 Identity = 120/217 (55.30%), Postives = 155/217 (71.43%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AKDI F ARA + GV ++A AVKVT+GP GRNV+I+K G P TKDGVTVA IE D +++GA +V++VA T+ AGDGTT ATVL QAI EG K+V AG +DL+ GI A+ V+++LK+ ++ IS+ +EI QV TISAN + EIGEL+A AMEKVGK+GVITV + M EL+ V GM+ RGY+SPYFVT+ T + EL+NPL Sbjct: 3 AKDIFFDTDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELADAVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGARPIDLKRGIDRAVKEVVAELKAISRSISSKKEIAQVGTISANNDPEIGELIAEAMEKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYFVTNSDTMEAELDNPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_VIBHA (60 kDa chaperonin 1 OS=Vibrio harveyi GN=groL1 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.037e-59 Identity = 114/216 (52.78%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A + K + + + I QV TISAN + +G ++A AMEKVG++GVITV +G + +EL+ V GM+ RGY+SPYF+ + + +LENP Sbjct: 3 AKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEQPKRASVECTDTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLENP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |