FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PELPD (60 kDa chaperonin OS=Pelobacter propionicus (strain DSM 2379) GN=groL PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 118/217 (54.38%), Postives = 158/217 (72.81%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AK I F R A+L+GV+ +A+ VKVT+GPKGRNV+I+KS G P +TKDGVTVA IE DK +++GA LVK+VA T+ AGDGTT ATVL QAI +G K VAAG N M+++ GI A++ ++++L+ ++ I +EI QV TISAN ++ IG+++A AMEKVGKEGVITV + +M LE+V GM+ RGY+SPYFVTDP+ + LEN L Sbjct: 3 AKIIKFDQEGRNAILKGVNILADTVKVTLGPKGRNVVIDKSFGAPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGSKLVAAGHNPMEIKRGIDKAVETIVAELQKISKPIVDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKSMDTTLETVEGMQFDRGYLSPYFVTDPERMEAALENAL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BORPE (60 kDa chaperonin OS=Bordetella pertussis GN=groL PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 114/216 (52.78%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR +++GV+ +A AVK T+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA LVK VA T+ AGDGTT ATVL QA++ EG K VAAG N +DL+ GI A+ A + +LK ++ ++T +EI QV +ISAN + IG+++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ P+ Q L++P Sbjct: 3 AKQVLFADEARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAVVQEGLKYVAAGFNPIDLKRGIDKAVAAAVEELKKLSKPVTTSKEIAQVGSISANSDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEKQVAALDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BORPA (60 kDa chaperonin OS=Bordetella parapertussis GN=groL PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 114/216 (52.78%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR +++GV+ +A AVK T+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA LVK VA T+ AGDGTT ATVL QA++ EG K VAAG N +DL+ GI A+ A + +LK ++ ++T +EI QV +ISAN + IG+++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ P+ Q L++P Sbjct: 3 AKQVLFADEARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAVVQEGLKYVAAGFNPIDLKRGIDKAVAAAVEELKKLSKPVTTSKEIAQVGSISANSDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEKQVAALDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BORBR (60 kDa chaperonin OS=Bordetella bronchiseptica GN=groL PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 114/216 (52.78%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK + F AR +++GV+ +A AVK T+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA LVK VA T+ AGDGTT ATVL QA++ EG K VAAG N +DL+ GI A+ A + +LK ++ ++T +EI QV +ISAN + IG+++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ P+ Q L++P Sbjct: 3 AKQVLFADEARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAVVQEGLKYVAAGFNPIDLKRGIDKAVAAAVEELKKLSKPVTTSKEIAQVGSISANSDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEKQVAALDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH604_SINMW (60 kDa chaperonin 4 OS=Sinorhizobium medicae (strain WSM419) GN=groL4 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 114/216 (52.78%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK+I F R +L+GV + AVKVT+GPKGRNV+I++S G P++TKDGV+VA IE DK +++GA +V++VA TN AGDGTT ATVL +I EG K VAAG+N MDL+ GI +A+ AV++++K RA +++ EI QV TI+ANG+ +GE++A AMEKVG EGVITV + T EL+ V GM+ RGY+SPYFVT+ + + EL++P Sbjct: 3 AKEIIFSTEVRDRLLRGVELLNNAVKVTLGPKGRNVVIDRSYGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAASIFREGAKLVAAGMNPMDLKRGIDLAVTAVLAEIKLRATKVNSSSEIAQVGTIAANGDASVGEMIAGAMEKVGNEGVITVEEARTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELDDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_BRASB (60 kDa chaperonin 2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL2 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.354e-59 Identity = 113/216 (52.31%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ F AR +++GV +A AVKVT+GPKGRNV+IEKS G P++TKDGVTVA IE DK +++GA L++QVA TN AGDGTT ATVL QAI+ EG K+VAA LN +DL+ GI +A+ I D++ RA+ + + EE+ QV TISAN + +G+++A A++KVG +GVITV + ++ EL+ V G++ RGY+SPYFVT+ E E P Sbjct: 3 AKDVKFAADARERLIRGVDILANAVKVTLGPKGRNVLIEKSFGAPRITKDGVTVAKEIELEDKYENLGAQLLRQVASKTNDLAGDGTTTATVLAQAIVREGAKAVAASLNPLDLKRGIDLAVAEAIKDIEKRARKVQSSEEVAQVGTISANSDAAVGKIIATAVKKVGNDGVITVEEAKSLETELDVVEGLQFDRGYLSPYFVTNSDKLLVEFEEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_CHLL2 (60 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.769e-59 Identity = 119/217 (54.84%), Postives = 157/217 (72.35%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AKDI F ARA + GV ++A AVKVT+GP GRNV+I+K G P TKDGVTVA IE D +++GA +V++VA T+ AGDGTT ATVL QAI EG K+VAAG +DL+ GI A+ V+++L++ ++ IS +EI QV TISAN + EIGEL+A AM+KVGK+GVITV + M EL+ V GM+ RGY+SPYFVT+P+T + E+E+PL Sbjct: 3 AKDIIFDSDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELADAVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMDTELKVVEGMQFDRGYLSPYFVTNPETMEAEIEDPL 219
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_RHIME (60 kDa chaperonin 3 OS=Rhizobium meliloti GN=groL3 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.769e-59 Identity = 115/216 (53.24%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK I F AR +L+GV + AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA +V+ VA TN AGDGTT ATVL +I EG K V+ G+N MDL+ GI + + AV++++K+RA + + EI QV TI+ANG+ +GE++ARAMEKVG EGVITV + T EL+ V GM+ RGY+SPYFVT+ + + ELE+P Sbjct: 3 AKQIVFSTDARDRLLRGVELLNNAVKVTLGPKGRNVVIDKSYGAPRITKDGVSVAKEIELEDKFENMGAQMVRAVASKTNDLAGDGTTTATVLAASIFREGAKLVSVGMNPMDLKRGIDLGVAAVLAEIKARATKVISSSEIAQVGTIAANGDAGVGEMIARAMEKVGNEGVITVEEARTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICBR (60 kDa chaperonin OS=Rickettsia bellii (strain RML369-C) GN=groL PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.310e-59 Identity = 117/215 (54.42%), Postives = 155/215 (72.09%), Query Frame = 3 Query: 78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 K I G AR ML+G+ +A+AVKVT+GPKGRNV+IE+S G PK+TKDGVTVA SIE +DK ++ GA L+K A + AGDGTT ATVL +A+ EG K VAAG N MDL+ G+ +A++ V+ ++K ++ I + EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV + ++E V GM RGY+SPYFVT+ + ELENP Sbjct: 4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGAPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNTVLEEVKKASKKIDSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RICB8 (60 kDa chaperonin OS=Rickettsia bellii (strain OSU 85-389) GN=groL PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.310e-59 Identity = 117/215 (54.42%), Postives = 155/215 (72.09%), Query Frame = 3 Query: 78 KDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 K I G AR ML+G+ +A+AVKVT+GPKGRNV+IE+S G PK+TKDGVTVA SIE +DK ++ GA L+K A + AGDGTT ATVL +A+ EG K VAAG N MDL+ G+ +A++ V+ ++K ++ I + EEI QV TIS+NG++EIGE +A+AME+VGKEGVITV + ++E V GM RGY+SPYFVT+ + ELENP Sbjct: 4 KLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGAPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNTVLEEVKKASKKIDSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |