FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO8A (60 kDa chaperonin OS=Escherichia coli O8 (strain IAI1) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO81 (60 kDa chaperonin OS=Escherichia coli O81 (strain ED1a) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO7I (60 kDa chaperonin OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO5E (60 kDa chaperonin OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO57 (60 kDa chaperonin OS=Escherichia coli O157:H7 GN=groL PE=3 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO55 (60 kDa chaperonin OS=Escherichia coli (strain 55989 / EAEC) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO45 (60 kDa chaperonin OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO27 (60 kDa chaperonin OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECO24 (60 kDa chaperonin OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=groL PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60C_DROME (60 kDa heat shock protein homolog 2, mitochondrial OS=Drosophila melanogaster GN=Hsp60C PE=2 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 124/225 (55.11%), Postives = 168/225 (74.67%), Query Frame = 3 Query: 51 VLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 VL RNY AKD+ FG RA MLQGV +A+AV VTMGPKGRNVIIE+S G+PK+TKDGVTVA SI +DK +++GA LV+ VA TN+ AGDGTT ATVL +AI EG + ++ G + +++R G+ +AI+ V +L+ ++ ++TPEEI QVATISANG++ +G L++ A++KVG++GVITV DG T+ +ELE + GMK RGYISPYF+ K K E ++ L Sbjct: 20 VLWARNY-AKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGVITVKDGKTLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDAL 243 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |