FC876216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_ASHGO (COP9 signalosome complex subunit 5 OS=Ashbya gossypii GN=RRI1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.623e-42 Identity = 83/157 (52.87%), Postives = 110/157 (70.06%), Query Frame = 1 Query: 235 AQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPE 705 +Q + QQE W DP YF++ +SALA +K++ HA GG +EV+G++ G + I+V+D++ LPVEGTETRVNAQ ++YEY V Y +T G VGWYHSHPGYGCWLSGID LNQ FQ+P+LA+V+DP R+ ++G GAFRT PE Sbjct: 54 SQVRVQQEL-WKQDPTYFQKAALSALACMKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLETAVPEGLA--IVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPKRSKASGVIDIGAFRTMPE 207
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_KLULA (COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis GN=RRI1 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38 Identity = 81/191 (42.41%), Postives = 117/191 (61.26%), Query Frame = 1 Query: 136 WELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPER 708 W N ++ ET +S++D+S + + + + +P +F++ IS LA KM+ HA GG IEVMG++ G T D I+V D ++LPV+GTETRVNA ++YEYMV Y + + + VGWYHSHPGYGCWLS ID+ LNQ +Q+P+LA+V+DP +++S GAFRT P + Sbjct: 17 WIQANEDINTETS-LSSSSDSSTTIPVI---DHLPARIPYATDLKRNPCHFQKCLISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESYEYMVQY--LDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSLSGNTLDIGAFRTLPSK 201
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_CANGA (COP9 signalosome complex subunit 5 OS=Candida glabrata GN=RRI1 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.509e-35 Identity = 71/151 (47.02%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 271 NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY--SQTNKQAGRLE---NAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPER 708 N P +++ V +S LA K++ HA GG IEVMG++ G G+ ++ D F LPVEGTET VNA ++YEYMV + + R E N +GWYHSHPGY CWLS ID+ LNQQ Q+P+LA+V+DP ++ + K G+FRTY ++ Sbjct: 66 NSPLFYQNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQKVRIGSFRTYQDQ 216
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_YEAST (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae GN=RRI1 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 238 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRT 696 +TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ LNQ+FQ+P++A+V+DP +++ GAFRT Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS7 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain YJM789) GN=RRI1 PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 238 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRT 696 +TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ LNQ+FQ+P++A+V+DP +++ GAFRT Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS1 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RRI1 PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 238 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRT 696 +TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ LNQ+FQ+P++A+V+DP +++ GAFRT Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 277 PHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKT-DGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEP 729 P + + IS+LALLKM+ HAR+G +EVMGLM G+ D I V+D FA+P GT V A ++ M+D KQ GR E +GWYHSHPG+GCWLS +DV+ +Q Q +AVV+DP ++V GK AFRT + P EP Sbjct: 25 PDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAMPQSGTSVSVEAIDPVFQTKMLDML---KQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSV-RGKVVIDAFRTI--KTSPTAEP 171
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 65/149 (43.62%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 289 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTY-PERIQPPDEP 729 ++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V+ +A + + + KQ GR E VGWYHSHPG+GCWLSG+D++ + + +AVV+DP ++V GK AFR+ P+ I EP Sbjct: 28 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRSINPQTIMLGQEP 173
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: YPT5_CAEEL (Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans GN=F37A4.5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.400e-24 Identity = 65/144 (45.14%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 268 VNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRT 696 ++ P + V IS+LALLKM+ HARSG +EVMGLM G D I V D FA+P GT V + Y+ + K GR EN VGWYHSHPG+GCWLS +DV+ + +AVV+DP ++V GK AFR+ Sbjct: 20 LDHPDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVDPVYQ--TKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVK-GKVMLDAFRS 160
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.440e-24 Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 295 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTY-PERIQPPDEP 729 V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++ + + +AVV+DP ++V GK AFRT P+ + EP Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVK-GKVVIDAFRTINPQSMALNQEP 176 The following BLAST results are available for this feature:
BLAST of FC876216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876216 ID=FC876216; Name=FC876216; organism=Citrus clementina; type=EST; length=754bpback to top |