FC876216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.573e-24 Identity = 64/137 (46.72%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 289 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFR 693 ++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++ + E +AVV+DP ++V GK AFR Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFR 161
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.573e-24 Identity = 64/137 (46.72%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 289 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFR 693 ++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++ + E +AVV+DP ++V GK AFR Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFR 161
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.891e-24 Identity = 64/137 (46.72%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 289 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFR 693 ++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++ + E +AVV+DP ++V GK AFR Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFR 159
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: RPN11_YEAST (26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae GN=RPN11 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.759e-23 Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 295 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFR 693 V IS++ALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A D ++ M+D KQ GR + VGWYHSHPG+GCWLS +DV+ +Q +AVV+DP ++V GK AFR Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVK-GKVVIDAFR 157
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: RPN11_CANGA (26S proteasome regulatory subunit RPN11 OS=Candida glabrata GN=RPN11 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23 Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 295 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFR 693 V IS++ALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A D ++ M+D KQ GR + VGWYHSHPG+GCWLS +DV+ +Q +AVV+DP ++V GK AFR Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVK-GKVVIDAFR 157
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: RPN11_ASHGO (26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii GN=RPN11 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23 Identity = 64/135 (47.41%), Postives = 83/135 (61.48%), Query Frame = 1 Query: 295 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFR 693 V IS+LALLKM+ H+R+G +EVMGLM G D + V+D FA+P GT V A D ++ M+D KQ GR + VGWYHSHPG+GCWLS +DV +Q +AVV+DP ++V GK AFR Sbjct: 32 VYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVK-GKVVIDAFR 162
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.373e-23 Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 295 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTY-PERIQPPDEP 729 V IS+LALLKM+ H R G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLS +D++ +Q +AVV+DP ++V GK AFR P + EP Sbjct: 30 VYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDML---KQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVK-GKVVIDAFRLINPSTLMMGQEP 173
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: RPN11_ENCCU (26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi GN=RPN11 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.436e-22 Identity = 59/134 (44.03%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 295 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFR 693 V+IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V + ++ ++ K GR E VGWYHSHPG+GCWLS +D+S ++ + +AVV+DP ++V GK AFR Sbjct: 21 VQISSLALLKMLKHGRAGIPLEVMGLMLGEFVDEYTVKVVDVFAMPQSGTNVTVESVDPIFQ--MEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPIQSVK-GKVVIDAFR 151 The following BLAST results are available for this feature:
BLAST of FC876216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876216 ID=FC876216; Name=FC876216; organism=Citrus clementina; type=EST; length=754bpback to top |