FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_STRP1 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=gap PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 383 VK+GINGFGRIGRL R I + VE+ +ND + + ++ KYD+ G++ ++VK+ + G + V R+PE I WA G E V+E+TG F Sbjct: 3 VKVGINGFGRIGRLAFRRIQNIEGVEVTRIND-LTDPNMLAHLLKYDTTQGRF-DGTVEVKEGGFEVNGNF-IKVSAERDPENIDWATDGVEIVLEATGFF 100
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_STREQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equisimilis GN=gap PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 383 VK+GINGFGRIGRL R I + VE+ +ND + + ++ KYD+ G++ ++VK+ + G + V R+PE I WA G E V+E+TG F Sbjct: 3 VKVGINGFGRIGRLAFRRIQNVEGVEVTRIND-LTDPNMLAHLLKYDTTQGRF-DGTVEVKEGGFEVNGNF-IKVSAERDPENIDWATDGVEIVLEATGFF 100
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_SHELP (D-erythrose-4-phosphate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=epd PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11 Identity = 42/148 (28.38%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNEHEYKPE 506 +K+ ING+GRIGR + R + + RD +++VA+N+ + M ++ +YD+ HG+++ D + G+ + + + E++PW + V E+TG V+IS PS DA + V GVN + K E Sbjct: 2 IKVAINGYGRIGRSILRALYESGKRDQIQIVAINE-LANPEAMLHLTQYDTTHGRFQ--SPASLDANVMTIGDDRIQLLHEADAEKLPWRSLDIDIVFEATGALIDRQACEAHIRAGAKQVLISHPSSGDVDATI-VYGVNHQDLKAE 145
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 42/147 (28.57%), Postives = 74/147 (50.34%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNEHEYKPE 506 +++ ING+GRIGR + R + + R +++VA+N+ + + ++ +YD+ HG++K H +K+ D+ LL G+ + + + +PWAE + V E+TG V+IS PS V GVN + E Sbjct: 2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINE-LAKPEAICHLTQYDTTHGRFK-HTVKLNGDQ-LLIGDDSILLLNQPDANLLPWAELDIDIVYEATGSLIDRQACEAHIHAGAKQVLISHPSSADVDETIVYGVNHDLLRAE 145
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_SALAR (D-erythrose-4-phosphate dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=epd PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 45/148 (30.41%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 506 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + + ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHEQTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_AERS4 (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=epd PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 43/141 (30.50%), Postives = 77/141 (54.61%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ--RD-DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM---FVVGVN 485 +KI ING+GRIGR V R + + RD ++++VA+N+ + M ++ ++D+ HG++++ ++L GE +++F ++P +PW G + V++ TGVF V+ S P+ DA + V GVN Sbjct: 2 IKIAINGYGRIGRNVLRALYESGRDKNIKIVAINE-LAAPEAMVHLTRFDTSHGRFRYPVQLA--GHSMLVGEDLISLFAEQDPANLPWRALGVDVVLDCTGVFGSRADAELHLGAGAGKVLFSHPA-DADVDATIVYGVN 138
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_SHESR (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=epd PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11 Identity = 40/147 (27.21%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNEHEYKPE 506 +++ ING+GRIGR + R + + R +++VA+N+ + + ++ +YD+ HG+++ +K+ DD+ +L G+ + + +P ++PW E + V E+TG V+IS PS V GVN+ + E Sbjct: 2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINE-LAKPEAIVHLTQYDTTHGRFQPR-VKLVDDQ-MLIGDDVIKILHEPDPAKLPWREMDIDIVYEATGAILDRNSCEAHIHAGAKQVLISHPSSADVDGTIVYGVNQDLLRAE 145 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |